RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ESR2Q92731 530 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 CLIC6Q96NY7 704 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 ANAPC4Q9UJX5 808 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 CCNL1Q9UK58 526 aaPredicted RBP23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 TNKSO95271 1327 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 UQCRHLA0A096LP55 91 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 UQCRHP07919 91 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 SLC3A2P08195 630 aaKnown RBP23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 DPCR1Q3MIW9 517 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 TMTC2Q8N394 836 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 WASF1Q92558 559 aa23.57■■□□□ 1.36
TUBGCP3-204ENST00000464139 PRDM1O75626 825 aa23.56■■□□□ 1.36
TUBGCP3-204ENST00000464139 SHC4Q6S5L8 630 aa23.56■■□□□ 1.36
TUBGCP3-204ENST00000464139 CRACR2BQ8N4Y2 399 aaPredicted RBP23.56■■□□□ 1.36
TUBGCP3-204ENST00000464139 PPP6R2O75170 966 aa23.56■■□□□ 1.36
TUBGCP3-204ENST00000464139 SARM1Q6SZW1 724 aa23.56■■□□□ 1.36
TUBGCP3-204ENST00000464139 MYH2Q9UKX2 1941 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 MMP1P03956 469 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 CHAF1AQ13111 956 aaPredicted RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 SEC23AQ15436 765 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 ZRSR1Q15695 479 aaKnown RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 CCDC144BQ3MJ40 725 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 NOSTRINQ8IVI9 506 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 MTA3Q9BTC8 594 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 JAG2Q9Y219 1238 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 BTAF1O14981 1849 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 SYKP43405 635 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 MECOMQ03112 1051 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 EVX2Q03828 476 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 TPTE2Q6XPS3 522 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 DIS3L2Q8IYB7 885 aaKnown RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 JMYQ8N9B5 988 aa23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 ARHGEF1Q92888 912 aaKnown RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 NSUN4Q96CB9 384 aaKnown RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 NAT10Q9H0A0 1025 aaKnown RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 RTCBQ9Y3I0 505 aaKnown RBP23.55■■□□□ 1.36
TUBGCP3-204ENST00000464139 HIBADHP31937 336 aaKnown RBP23.54■■□□□ 1.36
TUBGCP3-204ENST00000464139 RGL2O15211 777 aa23.54■■□□□ 1.36
TUBGCP3-204ENST00000464139 ENAHQ8N8S7 591 aaPredicted RBP23.54■■□□□ 1.36
TUBGCP3-204ENST00000464139 BRIP1Q9BX63 1249 aa23.54■■□□□ 1.36
TUBGCP3-204ENST00000464139 CCDC196A0A1B0GTZ2 297 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 DEXIO95424 95 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 SAFBQ15424 915 aaKnown RBP eCLIP23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 ISM2Q6H9L7 571 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 CTR9Q6PD62 1173 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 TXNRD3Q86VQ6 643 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 AATFQ9NY61 560 aaKnown RBP eCLIP23.53■■□□□ 1.362e-12■■■□□ 16.2
TUBGCP3-204ENST00000464139 CDC25BP30305 580 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 ZSCAN10Q96SZ4 725 aaPredicted RBP23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 USP21Q9UK80 565 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 HPSEQ9Y251 543 aa23.53■■□□□ 1.36
TUBGCP3-204ENST00000464139 USP17L12C9JPN9 530 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 USP17L21D6R901 530 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 PRDX5P30044 214 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 FNBP4Q8N3X1 1017 aaPredicted RBP23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 MRFAP1L1Q96HT8 127 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 EP400Q96L91 3159 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 SEMA3EO15041 775 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 NPHP1O15259 732 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 TM4SF1P30408 202 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 NR5A1Q13285 461 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 CACTINQ8WUQ7 758 aaKnown RBP23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 ANKRD2Q9GZV1 360 aa23.52■■□□□ 1.36
TUBGCP3-204ENST00000464139 RESP18Q5W5W9 173 aa23.51■■□□□ 1.35
TUBGCP3-204ENST00000464139 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.51■■□□□ 1.35
TUBGCP3-204ENST00000464139 SPECC1Q5M775 1068 aa23.51■■□□□ 1.35
TUBGCP3-204ENST00000464139 OXER1Q8TDS5 423 aa23.51■■□□□ 1.35
TUBGCP3-204ENST00000464139 hCG_1642624A0A1W2PR95 340 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 RCAN1P53805 252 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 NLRP12P59046 1061 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 DUOX1Q9NRD9 1551 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 MYH13Q9UKX3 1938 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 CUTAO60888 179 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 ARID5BQ14865 1188 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 IFIT1BQ5T764 474 aaKnown RBP23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 TIGD1Q96MW7 591 aa23.5■■□□□ 1.35
TUBGCP3-204ENST00000464139 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
TUBGCP3-204ENST00000464139 FOXP1Q9H334 677 aaPredicted RBP23.49■■□□□ 1.35
TUBGCP3-204ENST00000464139 COL24A1Q17RW2 1714 aa23.49■■□□□ 1.35
TUBGCP3-204ENST00000464139 ATP2B1P20020 1258 aa23.49■■□□□ 1.35
TUBGCP3-204ENST00000464139 SHISA4Q96DD7 197 aa23.49■■□□□ 1.35
TUBGCP3-204ENST00000464139 PNOCQ13519 176 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 KRI1Q8N9T8 703 aaKnown RBP23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 FAM237AA0A1B0GTK4 181 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 PLEKHA8P1O95397 391 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 GRIN1Q05586 938 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 LONRF3Q496Y0 759 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 IQCA1Q86XH1 822 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 DCP1AQ9NPI6 582 aaPredicted RBP23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 PCDHB6Q9Y5E3 794 aa23.48■■□□□ 1.35
TUBGCP3-204ENST00000464139 MYH6P13533 1939 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 CYP2D6P10635 497 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 RBM10P98175 930 aaKnown RBP23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 CATIPQ7Z7H3 387 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 BPIFA3Q9BQP9 254 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 VPS54Q9P1Q0 977 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 KCNH3Q9ULD8 1083 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 NMT2O60551 498 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms