RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CEP126Q9P2H0 1117 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 GABRQQ9UN88 632 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 AFG3L2Q9Y4W6 797 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 COL2A1P02458 1487 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 MYH1P12882 1939 aa9.82□□□□□ -0.84
CDC42BPA-210ENST00000462553 EYSQ5T1H1 3165 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 FMNL1O95466 1100 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 GJB1P08034 283 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 GNAI3P08754 354 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 RHBDL3P58872 404 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 MTX1Q13505 466 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 CCDC84Q86UT8 332 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 RAET1EQ8TD07 263 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 FAM163AQ96GL9 167 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 GNL3LQ9NVN8 582 aaKnown RBP9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 MROH7-TTC4A0A0A0MT08 1334 aa9.81□□□□□ -0.84
CDC42BPA-210ENST00000462553 HOXD10P28358 340 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 BTDP43251 543 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 FCGRTP55899 365 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 PANK1Q8TE04 598 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 UNC93B1Q9H1C4 597 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 RCAN3Q9UKA8 241 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 SLC45A1Q9Y2W3 748 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 ZHX2Q9Y6X8 837 aa9.8□□□□□ -0.84
CDC42BPA-210ENST00000462553 PNMA6EA0A0J9YXQ4 647 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 A0A1B0GUL7 405 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 FAM196BA6NMK8 535 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 GNAI2P04899 355 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 ELNP15502 786 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 TIMM10P62072 90 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 MECOMQ03112 1051 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 PICALMQ13492 652 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 TREML2Q5T2D2 321 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 PI16Q6UXB8 463 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 GADL1Q6ZQY3 521 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 DZIP1Q86YF9 867 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 ITPRIPQ8IWB1 547 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 FTSJ3Q8IY81 847 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 ZGPATQ8N5A5 531 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 RNF208Q9H0X6 261 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 C1orf115Q9H7X2 142 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 PICK1Q9NRD5 415 aa9.79□□□□□ -0.84
CDC42BPA-210ENST00000462553 GPR75-ASB3A0A0A6YYF3 556 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 SRGAP3O43295 1099 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 ADCY3O60266 1144 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 CTNND1O60716 968 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 FARP2O94887 1054 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 INHAP05111 366 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 FLT3LGP49771 235 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 TFCP2Q12800 502 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 IRF5Q13568 498 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 RRP1BQ14684 758 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 FASTKD5Q7L8L6 764 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 U2AF1L4Q8WU68 220 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 PAK6Q9NQU5 681 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 HMG20BQ9P0W2 317 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 ABCF2Q9UG63 623 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 AGTPBP1Q9UPW5 1226 aa9.78□□□□□ -0.84
CDC42BPA-210ENST00000462553 PRUNE2Q8WUY3 3088 aa9.77□□□□□ -0.84
CDC42BPA-210ENST00000462553 TNPO2O14787 897 aaKnown RBP9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 TBC1D12O60347 775 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 UBXN2AP68543 259 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 PXYLP1Q8TE99 480 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 DPF3Q92784 378 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 NSUN4Q96CB9 384 aaKnown RBP9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 VCANP13611 3396 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 CDH23Q9H251 3354 aa9.77□□□□□ -0.85
CDC42BPA-210ENST00000462553 NAV1Q8NEY1 1877 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 SGPL1O95470 568 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 ARID4AP29374 1257 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 MCAMP43121 646 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 MVPQ14764 893 aaKnown RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 FAM110CQ1W6H9 321 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 C20orf194Q5TEA3 1177 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 SPTY2D1Q68D10 685 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 TBC1D9Q6ZT07 1266 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 ERICH6Q7L0X2 663 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 ANKRD13CQ8N6S4 541 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 SSH3Q8TE77 659 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 SMCR8Q8TEV9 937 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 HTATIP2Q9BUP3 242 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 OSBPL5Q9H0X9 879 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 BIN2Q9UBW5 565 aaPredicted RBP9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 MYH8P13535 1937 aa9.76□□□□□ -0.85
CDC42BPA-210ENST00000462553 POTEMA6NI47 508 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 CEP85Q6P2H3 762 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 SPATA5Q8NB90 893 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 DIS3LQ8TF46 1054 aaKnown RBP9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 YTHDC1Q96MU7 727 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms