RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
RPSA-204ENST00000458478 DOCK1Q14185 1865 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 BAG3O95817 575 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 CAP2P40123 477 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 PPP4CP60510 307 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 SPP2Q13103 211 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 TREML2Q5T2D2 321 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 NAA16Q6N069 864 aaPredicted RBP13.83□□□□□ -0.2
RPSA-204ENST00000458478 ADGRA1Q86SQ6 560 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
RPSA-204ENST00000458478 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
RPSA-204ENST00000458478 AATFQ9NY61 560 aaKnown RBP eCLIP13.83□□□□□ -0.2not detected■■□□□ 12.9
RPSA-204ENST00000458478 AGTPBP1Q9UPW5 1226 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 PTPRFP10586 1907 aa13.83□□□□□ -0.2
RPSA-204ENST00000458478 MGAMO43451 1857 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 CCL5P13501 91 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 ZAP70P43403 619 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
RPSA-204ENST00000458478 ZNF280CQ8ND82 737 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 SMCR8Q8TEV9 937 aaPredicted RBP13.82□□□□□ -0.2
RPSA-204ENST00000458478 TGFBRAP1Q8WUH2 860 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
RPSA-204ENST00000458478 CCDC8Q9H0W5 538 aaPredicted RBP13.82□□□□□ -0.2
RPSA-204ENST00000458478 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
RPSA-204ENST00000458478 BIN2Q9UBW5 565 aaPredicted RBP13.82□□□□□ -0.2
RPSA-204ENST00000458478 COL2A1P02458 1487 aaPredicted RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
RPSA-204ENST00000458478 FLT3LGP49771 235 aa13.81□□□□□ -0.2
RPSA-204ENST00000458478 MAPKAPK5Q8IW41 473 aa13.81□□□□□ -0.2
RPSA-204ENST00000458478 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
RPSA-204ENST00000458478 PROCA1Q8NCQ7 364 aaPredicted RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
RPSA-204ENST00000458478 DHX36Q9H2U1 1008 aaKnown RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 PIH1D3Q9NQM4 214 aaKnown RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 HERC5Q9UII4 1024 aaKnown RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 DBNLQ9UJU6 430 aaKnown RBP13.81□□□□□ -0.2
RPSA-204ENST00000458478 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
RPSA-204ENST00000458478 ADCY3O60266 1144 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 GJB1P08034 283 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 PLCG2P16885 1265 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 GJA8P48165 433 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 HMGCS2P54868 508 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 UBXN2AP68543 259 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 JAG1P78504 1218 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
RPSA-204ENST00000458478 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
RPSA-204ENST00000458478 SLAIN1Q8ND83 568 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
RPSA-204ENST00000458478 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
RPSA-204ENST00000458478 ELNP15502 786 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
RPSA-204ENST00000458478 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
RPSA-204ENST00000458478 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 UNC93B1Q9H1C4 597 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 DNAJC18Q9H819 358 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 PALD1Q9ULE6 856 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 FLT1P17948 1338 aa13.79□□□□□ -0.2
RPSA-204ENST00000458478 IGSF3O75054 1194 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 CYP7A1P22680 504 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 IRF5Q13568 498 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 UBE2Q1Q7Z7E8 422 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 WDR18Q9BV38 432 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
RPSA-204ENST00000458478 AS3MTQ9HBK9 375 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
RPSA-204ENST00000458478 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 ATAD5Q96QE3 1844 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 DOCK3Q8IZD9 2030 aa13.78□□□□□ -0.2
RPSA-204ENST00000458478 H0YGN5 161 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 SGPL1O95470 568 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
RPSA-204ENST00000458478 BACE1P56817 501 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 PABPC4Q13310 644 aaKnown RBP eCLIP13.77□□□□□ -0.21not detected■■■■■ 40.5
RPSA-204ENST00000458478 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 SHROOM1Q2M3G4 852 aaPredicted RBP13.77□□□□□ -0.21
RPSA-204ENST00000458478 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
RPSA-204ENST00000458478 DPF3Q92784 378 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 COA7Q96BR5 231 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 COLQQ9Y215 455 aaPredicted RBP13.77□□□□□ -0.21
RPSA-204ENST00000458478 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.21
RPSA-204ENST00000458478 CDK5RAP2Q96SN8 1893 aa13.76□□□□□ -0.21
RPSA-204ENST00000458478 IDH1O75874 414 aaKnown RBP13.76□□□□□ -0.21
RPSA-204ENST00000458478 GDF11O95390 407 aa13.76□□□□□ -0.21
RPSA-204ENST00000458478 INHAP05111 366 aa13.76□□□□□ -0.21
RPSA-204ENST00000458478 ASNSP08243 561 aa13.76□□□□□ -0.21
RPSA-204ENST00000458478 MTMR2Q13614 643 aa13.76□□□□□ -0.21
RPSA-204ENST00000458478 CRACR2BQ8N4Y2 399 aaPredicted RBP13.76□□□□□ -0.21
RPSA-204ENST00000458478 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms