RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 PRPF40BQ6NWY9 871 aaKnown RBP6.52□□□□□ -1.37
UBDP1-202ENST00000457888 MPZL3Q6UWV2 235 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 PRR23BQ6ZRT6 265 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBDP1-202ENST00000457888 ISL2Q96A47 359 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 ANO2Q9NQ90 1003 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 GTF2IRD1Q9UHL9 959 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 FGD5Q6ZNL6 1462 aa6.52□□□□□ -1.37
UBDP1-202ENST00000457888 TARBP1Q13395 1621 aaKnown RBP6.51□□□□□ -1.37
UBDP1-202ENST00000457888 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 IGF2BP3O00425 579 aaKnown RBP eCLIP6.51□□□□□ -1.37
UBDP1-202ENST00000457888 C1QTNF9P0C862 333 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 PDIA4P13667 645 aaKnown RBP6.51□□□□□ -1.37
UBDP1-202ENST00000457888 ZNF211Q13398 564 aaPredicted RBP6.51□□□□□ -1.37
UBDP1-202ENST00000457888 ECM1Q16610 540 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 TTLL10Q6ZVT0 673 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 FAM214BQ7L5A3 538 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 SPACA3Q8IXA5 215 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 KIRREL1Q96J84 757 aa6.51□□□□□ -1.37
UBDP1-202ENST00000457888 TOP2BQ02880 1626 aa6.5□□□□□ -1.37
UBDP1-202ENST00000457888 AQRO60306 1485 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBDP1-202ENST00000457888 TDRD9Q8NDG6 1382 aaKnown RBP6.5□□□□□ -1.37
UBDP1-202ENST00000457888 TMEM88BA6NKF7 163 aa6.5□□□□□ -1.37
UBDP1-202ENST00000457888 CPNE3O75131 537 aaKnown RBP6.5□□□□□ -1.37
UBDP1-202ENST00000457888 RAPGEFL1Q9UHV5 662 aa6.5□□□□□ -1.37
UBDP1-202ENST00000457888 NFIBO00712 420 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 PPP1R15AO75807 674 aaPredicted RBP6.49□□□□□ -1.37
UBDP1-202ENST00000457888 KRT1P04264 644 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 ORC1Q13415 861 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 TMEM67Q5HYA8 995 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 PDZD3Q86UT5 571 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 RNF214Q8ND24 703 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 KCNB2Q92953 911 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 BRPF3Q9ULD4 1205 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 BIVM-ERCC5R4GMW8 1640 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 RUSC2Q8N2Y8 1516 aa6.49□□□□□ -1.37
UBDP1-202ENST00000457888 GADD45BO75293 160 aaPredicted RBP6.48□□□□□ -1.37
UBDP1-202ENST00000457888 BUD31P41223 144 aaPredicted RBP6.48□□□□□ -1.37
UBDP1-202ENST00000457888 CLCN7P51798 805 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 ERVK-24P63145 666 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 NKPD1Q17RQ9 610 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 ZC3H12AQ5D1E8 599 aaKnown RBP6.48□□□□□ -1.37
UBDP1-202ENST00000457888 CYFIP1Q7L576 1253 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 TRAK1Q9UPV9 953 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 PITPNM2Q9BZ72 1349 aa6.48□□□□□ -1.37
UBDP1-202ENST00000457888 IFT140Q96RY7 1462 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 PPP2R3AQ06190 1150 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 PHLDB3Q6NSJ2 640 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 AMIGO3Q86WK7 504 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 RETREG2Q8NC44 543 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 FBXO15Q8NCQ5 510 aaPredicted RBP6.47□□□□□ -1.37
UBDP1-202ENST00000457888 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 TMEM39AQ9NV64 488 aa6.47□□□□□ -1.37
UBDP1-202ENST00000457888 GPN3Q9UHW5 284 aaPredicted RBP6.47□□□□□ -1.37
UBDP1-202ENST00000457888 ABCA10Q8WWZ4 1543 aa6.46□□□□□ -1.37
UBDP1-202ENST00000457888 GNAT3A8MTJ3 354 aa6.46□□□□□ -1.38
UBDP1-202ENST00000457888 CCDC74AQ96AQ1 378 aa6.46□□□□□ -1.38
UBDP1-202ENST00000457888 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 GDNFP39905 211 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 PDE3BQ13370 1112 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 GRM2Q14416 872 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 DTHD1Q6ZMT9 781 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 DIRC2Q96SL1 478 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 TRAIPQ9BWF2 469 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 NSUN3Q9H649 340 aaKnown RBP6.45□□□□□ -1.38
UBDP1-202ENST00000457888 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
UBDP1-202ENST00000457888 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
UBDP1-202ENST00000457888 CARNS1A5YM72 827 aa6.44□□□□□ -1.38
UBDP1-202ENST00000457888 INHBBP09529 407 aa6.44□□□□□ -1.38
UBDP1-202ENST00000457888 STK35Q8TDR2 534 aa6.44□□□□□ -1.38
UBDP1-202ENST00000457888 DNAJC25Q9H1X3 360 aa6.44□□□□□ -1.38
UBDP1-202ENST00000457888 WDR97A6NE52 1622 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 EIF1AYO14602 144 aaKnown RBP6.43□□□□□ -1.38
UBDP1-202ENST00000457888 NDUFB5O43674 189 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 ICMTO60725 284 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 TMEM253P0C7T8 217 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 ARNTP27540 789 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 MAP1SQ66K74 1059 aaPredicted RBP6.43□□□□□ -1.38
UBDP1-202ENST00000457888 FAM129BQ96TA1 746 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 CD320Q9NPF0 282 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 EGFL7Q9UHF1 273 aa6.43□□□□□ -1.38
UBDP1-202ENST00000457888 GAPVD1Q14C86 1478 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 EOMESO95936 686 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 FCGRTP55899 365 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 KCNA10Q16322 511 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 PPM1JQ5JR12 505 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 NPAS4Q8IUM7 802 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 GPBAR1Q8TDU6 330 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 EMILIN2Q9BXX0 1053 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 FOXQ1Q9C009 403 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 PRDM5Q9NQX1 630 aaPredicted RBP6.42□□□□□ -1.38
UBDP1-202ENST00000457888 MAPK8IP1Q9UQF2 711 aa6.42□□□□□ -1.38
UBDP1-202ENST00000457888 NTF4P34130 210 aa6.41□□□□□ -1.38
UBDP1-202ENST00000457888 CTSWP56202 376 aa6.41□□□□□ -1.38
UBDP1-202ENST00000457888 CIAPIN1Q6FI81 312 aa6.41□□□□□ -1.38
UBDP1-202ENST00000457888 ATG14Q6ZNE5 492 aa6.41□□□□□ -1.38
UBDP1-202ENST00000457888 UBE3DQ7Z6J8 389 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms