RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MINPP1Q9UNW1 487 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 CASZ1Q86V15 1759 aa21.25■□□□□ 0.99
SEMA3B-209ENST00000456560 MAGEB6P1A0A0J9YX57 407 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 NLRP12P59046 1061 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 RTN1Q16799 776 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 DPCR1Q3MIW9 517 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 RIOK1Q9BRS2 568 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 CACNA1SQ13698 1873 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 TAF1P21675 1872 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 GUCY1A2P33402 732 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 TOMM22Q9NS69 142 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 RAI14Q9P0K7 980 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 ABCF2Q9UG63 623 aa21.24■□□□□ 0.99
SEMA3B-209ENST00000456560 RESP18Q5W5W9 173 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 BCL2L12Q9HB09 334 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 PRDM4Q9UKN5 801 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 CNTNAP4Q9C0A0 1308 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 ERICH2A1L162 156 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 MMP1P03956 469 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 CRACR2BQ8N4Y2 399 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 SDR42E1Q8WUS8 393 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 FBXW7Q969H0 707 aa21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 FAM84BQ96KN1 310 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-209ENST00000456560 ONECUT3O60422 494 aaPredicted RBP21.22■□□□□ 0.99
SEMA3B-209ENST00000456560 CUTAO60888 179 aa21.22■□□□□ 0.99
SEMA3B-209ENST00000456560 SYKP43405 635 aa21.22■□□□□ 0.99
SEMA3B-209ENST00000456560 SEC23AQ15436 765 aa21.22■□□□□ 0.99
SEMA3B-209ENST00000456560 NOSTRINQ8IVI9 506 aa21.22■□□□□ 0.99
SEMA3B-209ENST00000456560 TUBE1Q9UJT0 475 aa21.22■□□□□ 0.99
SEMA3B-209ENST00000456560 LRRC8AQ8IWT6 810 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 TRIM22Q8IYM9 498 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 FANCBQ8NB91 859 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 CELF1Q92879 486 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 CCDC196A0A1B0GTZ2 297 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 ZRSR1Q15695 479 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 CAVIN4Q5BKX8 364 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 ZNF654Q8IZM8 581 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 STK11IPQ8N1F8 1099 aa21.21■□□□□ 0.99
SEMA3B-209ENST00000456560 MINDY4BA8MYZ0 360 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 BTBD18B2RXH4 712 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 NEMFO60524 1076 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 DEXIO95424 95 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 TBC1D9BQ66K14 1250 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 FBXO33Q7Z6M2 555 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 ZNF384Q8TF68 577 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 TOB1P50616 345 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 ESR2Q92731 530 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 CLIC6Q96NY7 704 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 BRIP1Q9BX63 1249 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 FOXP1Q9H334 677 aaPredicted RBP21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
SEMA3B-209ENST00000456560 SMIM22K7EJ46 135 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 BIN1O00499 593 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 KCNQ4P56696 695 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 NCAPHQ15003 741 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 DIS3L2Q8IYB7 885 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 UBAC1Q9BSL1 405 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 PRDM10Q9NQV6 1147 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 KCNJ14Q9UNX9 436 aa21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 DYNLL1P63167 89 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 SAFBQ15424 915 aaKnown RBP eCLIP21.19■□□□□ 0.98
SEMA3B-209ENST00000456560 SEMA3EO15041 775 aa21.18■□□□□ 0.98
SEMA3B-209ENST00000456560 FGRP09769 529 aa21.18■□□□□ 0.98
SEMA3B-209ENST00000456560 ARID5BQ14865 1188 aa21.18■□□□□ 0.98
SEMA3B-209ENST00000456560 PPP2R5BQ15173 497 aa21.18■□□□□ 0.98
SEMA3B-209ENST00000456560 TNKSO95271 1327 aa21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 NARFQ9UHQ1 456 aa21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 DUOX1Q9NRD9 1551 aa21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 SMIM5Q71RC9 77 aa21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 CMTR1Q8N1G2 835 aaKnown RBP21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 KRI1Q8N9T8 703 aaKnown RBP21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 NUP133Q8WUM0 1156 aa21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 RGS17Q9UGC6 210 aaPredicted RBP21.17■□□□□ 0.98
SEMA3B-209ENST00000456560 PDS5AQ29RF7 1337 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 SMTNL1A8MU46 457 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 RPS8P62241 208 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 ELOA2Q8IYF1 753 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 NYXQ9GZU5 481 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 IKBKBO14920 756 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 GTF2E1P29083 439 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 RILPL1Q5EBL4 403 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 KRBA2Q6ZNG9 492 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 CCDC82Q8N4S0 544 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 ENAHQ8N8S7 591 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 ZSCAN10Q96SZ4 725 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 OSBPL5Q9H0X9 879 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 KCNH3Q9ULD8 1083 aa21.16■□□□□ 0.98
SEMA3B-209ENST00000456560 RPS6KA4O75676 772 aa21.15■□□□□ 0.98
SEMA3B-209ENST00000456560 KLRK1P26718 216 aa21.15■□□□□ 0.98
SEMA3B-209ENST00000456560 LONRF3Q496Y0 759 aa21.15■□□□□ 0.98
SEMA3B-209ENST00000456560 METTL16Q86W50 562 aaKnown RBP21.15■□□□□ 0.98
SEMA3B-209ENST00000456560 RNF26Q9BY78 433 aaPredicted RBP21.15■□□□□ 0.98
SEMA3B-209ENST00000456560 FBXO2Q9UK22 296 aaPredicted RBP21.15■□□□□ 0.98
SEMA3B-209ENST00000456560 COL24A1Q17RW2 1714 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms