RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 DDX12PQ92771 950 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 TBC1D31Q96DN5 1066 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 XPO4Q9C0E2 1151 aaKnown RBP9.12□□□□□ -0.95
BRCC3-208ENST00000453705 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 TJP1Q07157 1748 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 ANKRD36CQ5JPF3 1778 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 PABPN1LA6NDY0 278 aaKnown RBP9.12□□□□□ -0.95
BRCC3-208ENST00000453705 JAKMIP3Q5VZ66 844 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 SIRT2Q8IXJ6 389 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 IFNL3Q8IZI9 196 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 LTV1Q96GA3 475 aaPredicted RBP9.12□□□□□ -0.95
BRCC3-208ENST00000453705 SEPT3Q9UH03 358 aa9.12□□□□□ -0.95
BRCC3-208ENST00000453705 AK9Q5TCS8 1911 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
BRCC3-208ENST00000453705 CASQ1P31415 396 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 PEX19P40855 299 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 PIP4K2BP78356 416 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 BMP2KLQ5H9B9 411 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 MYO1HQ8N1T3 1032 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
BRCC3-208ENST00000453705 UTYO14607 1347 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 GNAI3P08754 354 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 PHKG2P15735 406 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 SERPINB3P29508 390 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 ZNF132P52740 706 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 EIF5P55010 431 aaKnown RBP9.11□□□□□ -0.95
BRCC3-208ENST00000453705 SATB1Q01826 763 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 MCL1Q07820 350 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 PDXDC2PQ6P474 469 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 ZNF449Q6P9G9 518 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 CHD1LQ86WJ1 897 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 LILRB2Q8N423 598 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 UBR7Q8N806 425 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 SERINC2Q96SA4 455 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 SAGE1Q9NXZ1 904 aa9.11□□□□□ -0.95
BRCC3-208ENST00000453705 AOX1Q06278 1338 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 BOLA2-SMG1P6H3BVE0 249 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 SNX2O60749 519 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 GRM1Q13255 1194 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 CEP85Q6P2H3 762 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 SKA1Q96BD8 255 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 DCAF5Q96JK2 942 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
BRCC3-208ENST00000453705 NEUROD4Q9HD90 331 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 PRDM11Q9NQV5 511 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 ATP8A1Q9Y2Q0 1164 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 PRKAB1Q9Y478 270 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 IPPQ9Y573 584 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 C19orf81C9J6K1 198 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L12C9JPN9 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L21D6R901 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
BRCC3-208ENST00000453705 IFNL2Q8IZJ0 200 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 CENPTQ96BT3 561 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRCC3-208ENST00000453705 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 PRM3Q9NNZ6 103 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 TBK1Q9UHD2 729 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 ACAD8Q9UKU7 415 aa9.1□□□□□ -0.95
BRCC3-208ENST00000453705 TMC7Q7Z402 723 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 SPDYE1Q8NFV5 336 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-208ENST00000453705 MS4A4AQ96JQ5 239 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 SMAD5Q99717 465 aaKnown RBP9.09□□□□□ -0.95
BRCC3-208ENST00000453705 ZNF408Q9H9D4 720 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 SLC52A2Q9HAB3 445 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 MKS1Q9NXB0 559 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 MAGED1Q9Y5V3 778 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-208ENST00000453705 ICMTO60725 284 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 FOSL1P15407 271 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 MAPK8P45983 427 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 MTX1Q13505 466 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 COL19A1Q14993 1142 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 KRT24Q2M2I5 525 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 ITFG2Q969R8 447 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 PCDHGB3Q9Y5G1 929 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
BRCC3-208ENST00000453705 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 MPHOSPH10O00566 681 aaKnown RBP9.08□□□□□ -0.96
BRCC3-208ENST00000453705 NR1I2O75469 434 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 PAX7P23759 505 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 CTHP32929 405 aa9.08□□□□□ -0.96
BRCC3-208ENST00000453705 PPM1FP49593 454 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms