RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
LYSMD3-202ENST00000453259 RPTORQ8N122 1335 aa17.68■□□□□ 0.42
LYSMD3-202ENST00000453259 MECOMQ03112 1051 aa17.67■□□□□ 0.42
LYSMD3-202ENST00000453259 MTX1Q13505 466 aa17.67■□□□□ 0.42
LYSMD3-202ENST00000453259 SH3D19Q5HYK7 790 aa17.67■□□□□ 0.42
LYSMD3-202ENST00000453259 PAWRQ96IZ0 340 aaKnown RBP17.67■□□□□ 0.42
LYSMD3-202ENST00000453259 NBPF3Q9H094 633 aa17.67■□□□□ 0.42
LYSMD3-202ENST00000453259 HMX1Q9NP08 348 aaPredicted RBP17.67■□□□□ 0.42
LYSMD3-202ENST00000453259 A0A1B0GUL7 405 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 ADORA1P30542 326 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 TREML2Q5T2D2 321 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 TRMT44Q8IYL2 757 aaKnown RBP17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 SLC17A8Q8NDX2 589 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 GDF15Q99988 308 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 DHX36Q9H2U1 1008 aaKnown RBP17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 GINM1Q9NU53 330 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 MORF4L1Q9UBU8 362 aa17.66■□□□□ 0.42
LYSMD3-202ENST00000453259 USP17L5A8MUK1 530 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 GNAI3P08754 354 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 CAP2P40123 477 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 SPP2Q13103 211 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 SOCS4Q8WXH5 440 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 XAGE2Q96GT9 111 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
LYSMD3-202ENST00000453259 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 TIMM10P62072 90 aa17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 GTF3C2Q8WUA4 911 aaPredicted RBP17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 NSUN4Q96CB9 384 aaKnown RBP17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 WDR18Q9BV38 432 aa17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 ASCC2Q9H1I8 757 aaPredicted RBP17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 GJD2Q9UKL4 321 aa17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 PA2G4Q9UQ80 394 aaKnown RBP17.64■□□□□ 0.41
LYSMD3-202ENST00000453259 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 ASNSP08243 561 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 PLCG2P16885 1265 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 HOXA7P31268 230 aaPredicted RBP17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 HMGCS2P54868 508 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 LRIT3Q3SXY7 679 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 SPATA5Q8NB90 893 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 NOL10Q9BSC4 688 aaKnown RBP17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 PI4KBQ9UBF8 816 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 OGDHLQ9ULD0 1010 aa17.63■□□□□ 0.41
LYSMD3-202ENST00000453259 LAMA3Q16787 3333 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 C19orf81C9J6K1 198 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 DLL1O00548 723 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 ARID4AP29374 1257 aaPredicted RBP17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 MNX1P50219 401 aaPredicted RBP17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 MAP3K21Q5TCX8 1036 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 ZNF384Q8TF68 577 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 C11orf49Q9H6J7 331 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 HMG20BQ9P0W2 317 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 NOB1Q9ULX3 412 aaKnown RBP17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 ATAD5Q96QE3 1844 aa17.62■□□□□ 0.41
LYSMD3-202ENST00000453259 SOX1O00570 391 aaPredicted RBP17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 BAG3O95817 575 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 UQCRFS1P1P0C7P4 283 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 MAPK4P31152 587 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 BACE1P56817 501 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 TFCP2Q12800 502 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 GORABQ5T7V8 394 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 MEIS3Q99687 375 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 TMOD4Q9NZQ9 345 aa17.61■□□□□ 0.41
LYSMD3-202ENST00000453259 ALPK3Q96L96 1907 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 DOCK3Q8IZD9 2030 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 CCDC84Q86UT8 332 aaPredicted RBP17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 METTL16Q86W50 562 aaKnown RBP17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 TEX11Q8IYF3 940 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 C7orf61Q8IZ16 206 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 NUDT12Q9BQG2 462 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 RAI14Q9P0K7 980 aa17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
LYSMD3-202ENST00000453259 PDE3AQ14432 1141 aa17.59■□□□□ 0.41
LYSMD3-202ENST00000453259 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
LYSMD3-202ENST00000453259 TDHQ8IZJ6 230 aa17.59■□□□□ 0.41
LYSMD3-202ENST00000453259 LRCH3Q96II8 777 aa17.59■□□□□ 0.41
LYSMD3-202ENST00000453259 NEUROD6Q96NK8 337 aa17.59■□□□□ 0.41
LYSMD3-202ENST00000453259 MAST2Q6P0Q8 1798 aa17.58■□□□□ 0.41
LYSMD3-202ENST00000453259 DDX60LQ5H9U9 1706 aaKnown RBP17.58■□□□□ 0.41
LYSMD3-202ENST00000453259 FAM196BA6NMK8 535 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 SLURP2P0DP57 97 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 MTMR2Q13614 643 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 CERS3Q8IU89 383 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 TRIB2Q92519 343 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 LRP2BPQ9P2M1 347 aa17.58■□□□□ 0.4
LYSMD3-202ENST00000453259 COL6A3P12111 3177 aa17.57■□□□□ 0.4
LYSMD3-202ENST00000453259 PRKAR2AP13861 404 aaKnown RBP17.57■□□□□ 0.4
LYSMD3-202ENST00000453259 PPP4CP60510 307 aa17.57■□□□□ 0.4
LYSMD3-202ENST00000453259 HERVK_113P62684 666 aa17.57■□□□□ 0.4
LYSMD3-202ENST00000453259 STXBP5LQ9Y2K9 1186 aa17.57■□□□□ 0.4
LYSMD3-202ENST00000453259 PLXNB2O15031 1838 aa17.56■□□□□ 0.4
LYSMD3-202ENST00000453259 USP17L10C9JJH3 530 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms