RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 PDE4AP27815 886 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 INHBEP58166 350 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 SREBF2Q12772 1141 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
HDAC6-211ENST00000443563 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 GIMAP6Q6P9H5 292 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
HDAC6-211ENST00000443563 ERO1BQ86YB8 467 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 OSBP2Q969R2 916 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 OPTNQ96CV9 577 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 STRBPQ96SI9 672 aaKnown RBP13.01□□□□□ -0.33
HDAC6-211ENST00000443563 EHD4Q9H223 541 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-211ENST00000443563 MCM9Q9NXL9 1143 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-211ENST00000443563 PALD1Q9ULE6 856 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 ATAD5Q96QE3 1844 aa13.01□□□□□ -0.33
HDAC6-211ENST00000443563 BAZ2AQ9UIF9 1905 aaKnown RBP13□□□□□ -0.33
HDAC6-211ENST00000443563 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
HDAC6-211ENST00000443563 PHF20L1A8MW92 1017 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 GPAA1O43292 621 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 CA12O43570 354 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 INPP5BP32019 993 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 KIF23Q02241 960 aaPredicted RBP13□□□□□ -0.33
HDAC6-211ENST00000443563 SLFNL1Q499Z3 407 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 SDR42E1Q8WUS8 393 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
HDAC6-211ENST00000443563 PICK1Q9NRD5 415 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 HELLSQ9NRZ9 838 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 GINM1Q9NU53 330 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 SERPINB13Q9UIV8 391 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 SNCAIPQ9Y6H5 919 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 MYH8P13535 1937 aa13□□□□□ -0.33
HDAC6-211ENST00000443563 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 CHGBP05060 677 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
HDAC6-211ENST00000443563 PPATQ06203 517 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 SCYL3Q8IZE3 742 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 NACAP1Q9BZK3 213 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 WBP1LQ9NX94 342 aa12.99□□□□□ -0.33
HDAC6-211ENST00000443563 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
HDAC6-211ENST00000443563 M0R2C6 588 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 PRKAB2O43741 272 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 APPP05067 770 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 TM4SF4P48230 202 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 GTF2A2P52657 109 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
HDAC6-211ENST00000443563 PPIL2Q13356 520 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
HDAC6-211ENST00000443563 ARPP21Q9UBL0 812 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-211ENST00000443563 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
HDAC6-211ENST00000443563 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
HDAC6-211ENST00000443563 SDSP20132 328 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 CAP2P40123 477 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 MCMDC2Q4G0Z9 681 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 OTUD7BQ6GQQ9 843 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 SEC62Q99442 399 aaKnown RBP12.97□□□□□ -0.33
HDAC6-211ENST00000443563 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 SAGE1Q9NXZ1 904 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
HDAC6-211ENST00000443563 FAM196BA6NMK8 535 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 GSG1L2A8MUP6 293 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 USP17L21D6R901 530 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 ALDH1A1P00352 501 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 ASNSP08243 561 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 PTPRAP18433 802 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 GJA5P36382 358 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 TDO2P48775 406 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 PLCD1P51178 756 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 SNAPC2Q13487 334 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 TATDN1Q6P1N9 297 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 PHIPQ8WWQ0 1821 aa12.96□□□□□ -0.33
HDAC6-211ENST00000443563 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CXCL11O14625 94 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CETPP11597 493 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 GSPT1P15170 499 aaKnown RBP12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-211ENST00000443563 NMIQ13287 307 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CERKLQ49MI3 558 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CTR9Q6PD62 1173 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 FAM227BQ96M60 508 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 NAPBQ9H115 298 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 ZNF287Q9HBT7 754 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
HDAC6-211ENST00000443563 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms