RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 NAA16Q6N069 864 aaPredicted RBP21.76■■□□□ 1.07
GPC1-203ENST00000425056 GADL1Q6ZQY3 521 aa21.76■■□□□ 1.07
GPC1-203ENST00000425056 SH3RF3Q8TEJ3 882 aaPredicted RBP21.76■■□□□ 1.07
GPC1-203ENST00000425056 NOL10Q9BSC4 688 aaKnown RBP21.76■■□□□ 1.07
GPC1-203ENST00000425056 TRIM75PA6NK02 468 aa21.75■■□□□ 1.07
GPC1-203ENST00000425056 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
GPC1-203ENST00000425056 FMNL1O95466 1100 aaPredicted RBP21.75■■□□□ 1.07
GPC1-203ENST00000425056 CYP2E1P05181 493 aaPredicted RBP21.75■■□□□ 1.07
GPC1-203ENST00000425056 SLC4A8Q2Y0W8 1093 aa21.75■■□□□ 1.07
GPC1-203ENST00000425056 CCDC84Q86UT8 332 aaPredicted RBP21.75■■□□□ 1.07
GPC1-203ENST00000425056 DBNLQ9UJU6 430 aaKnown RBP21.75■■□□□ 1.07
GPC1-203ENST00000425056 MYPNQ86TC9 1320 aa21.75■■□□□ 1.07
GPC1-203ENST00000425056 BAG3O95817 575 aa21.74■■□□□ 1.07
GPC1-203ENST00000425056 PLCG2P16885 1265 aa21.74■■□□□ 1.07
GPC1-203ENST00000425056 FCGRTP55899 365 aa21.74■■□□□ 1.07
GPC1-203ENST00000425056 AATFQ9NY61 560 aaKnown RBP eCLIP21.74■■□□□ 1.07
GPC1-203ENST00000425056 HERC5Q9UII4 1024 aaKnown RBP21.74■■□□□ 1.07
GPC1-203ENST00000425056 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
GPC1-203ENST00000425056 PPP4CP60510 307 aa21.73■■□□□ 1.07
GPC1-203ENST00000425056 CEP85Q6P2H3 762 aa21.73■■□□□ 1.07
GPC1-203ENST00000425056 ADGRA1Q86SQ6 560 aa21.73■■□□□ 1.07
GPC1-203ENST00000425056 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
GPC1-203ENST00000425056 DHX36Q9H2U1 1008 aaKnown RBP21.73■■□□□ 1.07
GPC1-203ENST00000425056 TLR7Q9NYK1 1049 aaKnown RBP21.73■■□□□ 1.07
GPC1-203ENST00000425056 MYCP01106 439 aaPredicted RBP21.72■■□□□ 1.07
GPC1-203ENST00000425056 GRK4P32298 578 aa21.72■■□□□ 1.07
GPC1-203ENST00000425056 CAP2P40123 477 aa21.72■■□□□ 1.07
GPC1-203ENST00000425056 ZAP70P43403 619 aa21.72■■□□□ 1.07
GPC1-203ENST00000425056 PROCA1Q8NCQ7 364 aaPredicted RBP21.72■■□□□ 1.07
GPC1-203ENST00000425056 RAET1EQ8TD07 263 aa21.72■■□□□ 1.07
GPC1-203ENST00000425056 PRKCZQ05513 592 aa21.71■■□□□ 1.07
GPC1-203ENST00000425056 RRP1BQ14684 758 aaKnown RBP21.71■■□□□ 1.07
GPC1-203ENST00000425056 ZNF280CQ8ND82 737 aa21.71■■□□□ 1.07
GPC1-203ENST00000425056 SMCR8Q8TEV9 937 aaPredicted RBP21.71■■□□□ 1.07
GPC1-203ENST00000425056 EAF2Q96CJ1 260 aaPredicted RBP21.71■■□□□ 1.07
GPC1-203ENST00000425056 PIH1D3Q9NQM4 214 aaKnown RBP21.71■■□□□ 1.07
GPC1-203ENST00000425056 PI4KBQ9UBF8 816 aa21.71■■□□□ 1.07
GPC1-203ENST00000425056 FLT1P17948 1338 aa21.71■■□□□ 1.07
GPC1-203ENST00000425056 SPP2Q13103 211 aa21.7■■□□□ 1.06
GPC1-203ENST00000425056 MTFR1Q15390 333 aa21.7■■□□□ 1.06
GPC1-203ENST00000425056 TREML2Q5T2D2 321 aa21.7■■□□□ 1.06
GPC1-203ENST00000425056 CCDC8Q9H0W5 538 aaPredicted RBP21.7■■□□□ 1.06
GPC1-203ENST00000425056 PNMA3Q9UL41 463 aa21.7■■□□□ 1.06
GPC1-203ENST00000425056 METTL16Q86W50 562 aaKnown RBP21.69■■□□□ 1.06
GPC1-203ENST00000425056 TGFBRAP1Q8WUH2 860 aa21.69■■□□□ 1.06
GPC1-203ENST00000425056 GCC1Q96CN9 775 aa21.69■■□□□ 1.06
GPC1-203ENST00000425056 DNAJC18Q9H819 358 aa21.69■■□□□ 1.06
GPC1-203ENST00000425056 USP17L5A8MUK1 530 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 ERC1Q8IUD2 1116 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 MAPKAPK5Q8IW41 473 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 SLAIN1Q8ND83 568 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 PANK1Q8TE04 598 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 SHISA4Q96DD7 197 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 GABRQQ9UN88 632 aa21.68■■□□□ 1.06
GPC1-203ENST00000425056 MYH1P12882 1939 aa21.67■■□□□ 1.06
GPC1-203ENST00000425056 HMGCS2P54868 508 aa21.67■■□□□ 1.06
GPC1-203ENST00000425056 FAM110CQ1W6H9 321 aa21.67■■□□□ 1.06
GPC1-203ENST00000425056 SH3D19Q5HYK7 790 aa21.67■■□□□ 1.06
GPC1-203ENST00000425056 AS3MTQ9HBK9 375 aa21.67■■□□□ 1.06
GPC1-203ENST00000425056 EXOC6BQ9Y2D4 811 aa21.67■■□□□ 1.06
GPC1-203ENST00000425056 ASNSP08243 561 aa21.66■■□□□ 1.06
GPC1-203ENST00000425056 ANKRD13CQ8N6S4 541 aa21.66■■□□□ 1.06
GPC1-203ENST00000425056 WDR18Q9BV38 432 aa21.66■■□□□ 1.06
GPC1-203ENST00000425056 DOCK3Q8IZD9 2030 aa21.66■■□□□ 1.06
GPC1-203ENST00000425056 DDX60LQ5H9U9 1706 aaKnown RBP21.66■■□□□ 1.06
GPC1-203ENST00000425056 TNPO2O14787 897 aaKnown RBP21.65■■□□□ 1.06
GPC1-203ENST00000425056 IDH1O75874 414 aaKnown RBP21.65■■□□□ 1.06
GPC1-203ENST00000425056 CYP7A1P22680 504 aa21.65■■□□□ 1.06
GPC1-203ENST00000425056 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.06
GPC1-203ENST00000425056 TMED8Q6PL24 325 aaPredicted RBP21.65■■□□□ 1.06
GPC1-203ENST00000425056 CERS3Q8IU89 383 aa21.65■■□□□ 1.06
GPC1-203ENST00000425056 FOXP4Q8IVH2 680 aaPredicted RBP21.65■■□□□ 1.06
GPC1-203ENST00000425056 NKX2-3Q8TAU0 364 aa21.65■■□□□ 1.06
GPC1-203ENST00000425056 PALD1Q9ULE6 856 aa21.65■■□□□ 1.06
GPC1-203ENST00000425056 GJB1P08034 283 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 MS4A1P11836 297 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 CCL5P13501 91 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 GCLCP48506 637 aaPredicted RBP21.64■■□□□ 1.05
GPC1-203ENST00000425056 FLT3LGP49771 235 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 DYNLL1P63167 89 aaKnown RBP21.64■■□□□ 1.05
GPC1-203ENST00000425056 UBXN2AP68543 259 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 IRF5Q13568 498 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 AACSQ86V21 672 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.05
GPC1-203ENST00000425056 GINM1Q9NU53 330 aa21.64■■□□□ 1.05
GPC1-203ENST00000425056 ADCY3O60266 1144 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 HLA-DOAP06340 250 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 GJA8P48165 433 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 JAG1P78504 1218 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 HSP90AB4PQ58FF6 505 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 PXYLP1Q8TE99 480 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 TRIM34Q9BYJ4 488 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 ASCC2Q9H1I8 757 aaPredicted RBP21.63■■□□□ 1.05
GPC1-203ENST00000425056 ANTXR1Q9H6X2 564 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 BIN2Q9UBW5 565 aaPredicted RBP21.63■■□□□ 1.05
GPC1-203ENST00000425056 NDUFB9Q9Y6M9 179 aa21.63■■□□□ 1.05
GPC1-203ENST00000425056 BACE1P56817 501 aa21.62■■□□□ 1.05
GPC1-203ENST00000425056 MTMR2Q13614 643 aa21.62■■□□□ 1.05
GPC1-203ENST00000425056 MAGEB6Q8N7X4 407 aa21.62■■□□□ 1.05
GPC1-203ENST00000425056 MIGA1Q8NAN2 632 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms