RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 INHAP05111 366 aa20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 TREML2Q5T2D2 321 aa20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 ANKRD13CQ8N6S4 541 aa20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 COA7Q96BR5 231 aa20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 LOC285556D6RIA3 1793 aa20.8■□□□□ 0.92
UPF3AP3-201ENST00000420996 FAM196BA6NMK8 535 aa20.8■□□□□ 0.92
UPF3AP3-201ENST00000420996 ARID4AP29374 1257 aaPredicted RBP20.8■□□□□ 0.92
UPF3AP3-201ENST00000420996 FAM110CQ1W6H9 321 aa20.8■□□□□ 0.92
UPF3AP3-201ENST00000420996 PI16Q6UXB8 463 aa20.8■□□□□ 0.92
UPF3AP3-201ENST00000420996 TBC1D9Q6ZT07 1266 aa20.8■□□□□ 0.92
UPF3AP3-201ENST00000420996 CAP2P40123 477 aa20.79■□□□□ 0.92
UPF3AP3-201ENST00000420996 SPP2Q13103 211 aa20.79■□□□□ 0.92
UPF3AP3-201ENST00000420996 ZNF280CQ8ND82 737 aa20.79■□□□□ 0.92
UPF3AP3-201ENST00000420996 RAI14Q9P0K7 980 aa20.79■□□□□ 0.92
UPF3AP3-201ENST00000420996 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 TFRCP02786 760 aaKnown RBP20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 GCLCP48506 637 aaPredicted RBP20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 PABPC4Q13310 644 aaKnown RBP eCLIP20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 DEFB118Q96PH6 123 aa20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 PRO3102Q9H379 93 aa20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 PAK6Q9NQU5 681 aaPredicted RBP20.78■□□□□ 0.92
UPF3AP3-201ENST00000420996 IPO8O15397 1037 aaKnown RBP20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 GNAI2P04899 355 aa20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 G3BP1Q13283 466 aaKnown RBP eCLIP20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 TEX11Q8IYF3 940 aa20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 CRISPLD2Q9H0B8 497 aa20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 LRP2BPQ9P2M1 347 aa20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 HERC5Q9UII4 1024 aaKnown RBP20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 TAOK2Q9UL54 1235 aa20.77■□□□□ 0.92
UPF3AP3-201ENST00000420996 USP17L5A8MUK1 530 aa20.76■□□□□ 0.91
UPF3AP3-201ENST00000420996 MCAMP43121 646 aa20.76■□□□□ 0.91
UPF3AP3-201ENST00000420996 HMGCS2P54868 508 aa20.76■□□□□ 0.91
UPF3AP3-201ENST00000420996 RRP1BQ14684 758 aaKnown RBP20.76■□□□□ 0.91
UPF3AP3-201ENST00000420996 PNMA6EA0A0J9YXQ4 647 aa20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 TRIM27P14373 513 aa20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 SH3D19Q5HYK7 790 aa20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 NOL10Q9BSC4 688 aaKnown RBP20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 ASCC2Q9H1I8 757 aaPredicted RBP20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 AS3MTQ9HBK9 375 aa20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 PI4KBQ9UBF8 816 aa20.75■□□□□ 0.91
UPF3AP3-201ENST00000420996 EVI5O60447 810 aa20.74■□□□□ 0.91
UPF3AP3-201ENST00000420996 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
UPF3AP3-201ENST00000420996 SH3RF3Q8TEJ3 882 aaPredicted RBP20.74■□□□□ 0.91
UPF3AP3-201ENST00000420996 DHX36Q9H2U1 1008 aaKnown RBP20.74■□□□□ 0.91
UPF3AP3-201ENST00000420996 BAG3O95817 575 aa20.73■□□□□ 0.91
UPF3AP3-201ENST00000420996 PLCG2P16885 1265 aa20.73■□□□□ 0.91
UPF3AP3-201ENST00000420996 WDR18Q9BV38 432 aa20.73■□□□□ 0.91
UPF3AP3-201ENST00000420996 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.73■□□□□ 0.91
UPF3AP3-201ENST00000420996 GJD2Q9UKL4 321 aa20.73■□□□□ 0.91
UPF3AP3-201ENST00000420996 SIPA1L1O43166 1804 aa20.73■□□□□ 0.91
UPF3AP3-201ENST00000420996 HMGCRP04035 888 aa20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 NAA16Q6N069 864 aaPredicted RBP20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 PAWRQ96IZ0 340 aaKnown RBP20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 CDK5RAP2Q96SN8 1893 aa20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 MAST2Q6P0Q8 1798 aa20.72■□□□□ 0.91
UPF3AP3-201ENST00000420996 ALPK3Q96L96 1907 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 A0A1W2PPC1 479 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 ASNSP08243 561 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 PPP4CP60510 307 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 NECAB2Q7Z6G3 386 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 ANKLE1Q8NAG6 615 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 FRAT1Q92837 279 aaPredicted RBP20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 AATFQ9NY61 560 aaKnown RBP eCLIP20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 MORF4L1Q9UBU8 362 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 FOCADQ5VW36 1801 aa20.71■□□□□ 0.91
UPF3AP3-201ENST00000420996 BCAR3O75815 825 aa20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 HOXA7P31268 230 aaPredicted RBP20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 BACE1P56817 501 aa20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 TTC39AQ5SRH9 613 aa20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 METTL16Q86W50 562 aaKnown RBP20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 FOXP4Q8IVH2 680 aaPredicted RBP20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 CLUAP1Q96AJ1 413 aa20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 SNRKQ9NRH2 765 aa20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 RPTORQ8N122 1335 aa20.7■□□□□ 0.9
UPF3AP3-201ENST00000420996 MYO5AQ9Y4I1 1855 aaKnown RBP20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 IGSF3O75054 1194 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 IRX3P78415 501 aaPredicted RBP20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 MTMR2Q13614 643 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 CCDC158Q5M9N0 1113 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 TGFBRAP1Q8WUH2 860 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 HMX1Q9NP08 348 aaPredicted RBP20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 GINM1Q9NU53 330 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 TMOD4Q9NZQ9 345 aa20.69■□□□□ 0.9
UPF3AP3-201ENST00000420996 C19orf81C9J6K1 198 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 POLA2Q14181 598 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 TNNI3KQ59H18 835 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 MAPKAPK5Q8IW41 473 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 DIS3LQ8TF46 1054 aaKnown RBP20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 DBNDD2Q9BQY9 259 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 FPGT-TNNI3KV9GXZ4 949 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 FLT1P17948 1338 aa20.68■□□□□ 0.9
UPF3AP3-201ENST00000420996 RANBP2P49792 3224 aaKnown RBP20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 CYP2E1P05181 493 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms