RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 TIGD1Q96MW7 591 aa13.46□□□□□ -0.25
RBM28-202ENST00000415472 CCDC94Q9BW85 323 aaPredicted RBP13.46□□□□□ -0.25
RBM28-202ENST00000415472 KRT23Q9C075 422 aa13.46□□□□□ -0.25
RBM28-202ENST00000415472 CNNM2Q9H8M5 875 aa13.46□□□□□ -0.25
RBM28-202ENST00000415472 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
RBM28-202ENST00000415472 KCNH3Q9ULD8 1083 aa13.46□□□□□ -0.25
RBM28-202ENST00000415472 STK36Q9NRP7 1315 aa13.46□□□□□ -0.25
RBM28-202ENST00000415472 hCG_1642624A0A1W2PR95 340 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 FAM205CA6NFA0 338 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 NEMFO60524 1076 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 FANCCQ00597 558 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 PPARAQ07869 468 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 PPP4R3BQ5MIZ7 849 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.26
RBM28-202ENST00000415472 ZNF384Q8TF68 577 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 PCDHB6Q9Y5E3 794 aa13.46□□□□□ -0.26
RBM28-202ENST00000415472 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
RBM28-202ENST00000415472 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 DYNLL1P63167 89 aaKnown RBP13.45□□□□□ -0.26
RBM28-202ENST00000415472 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 HSP90AA4PQ58FG1 418 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 USP49Q70CQ1 688 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 GRAMD1CQ8IYS0 662 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 CRACR2BQ8N4Y2 399 aaPredicted RBP13.45□□□□□ -0.26
RBM28-202ENST00000415472 RGS22Q8NE09 1264 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 PCDHA5Q9Y5H7 936 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
RBM28-202ENST00000415472 BAZ2AQ9UIF9 1905 aaKnown RBP13.45□□□□□ -0.26
RBM28-202ENST00000415472 CUTAO60888 179 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
RBM28-202ENST00000415472 GOLGA8FQ08AF8 430 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 GOLGA8DPQ0D2H9 430 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 KRBA2Q6ZNG9 492 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 ZNF654Q8IZM8 581 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 NACAP1Q9BZK3 213 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 BAZ2BQ9UIF8 2168 aaKnown RBP13.44□□□□□ -0.26
RBM28-202ENST00000415472 ROBO1Q9Y6N7 1651 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 TMEM232C9JQI7 657 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 PRDM1O75626 825 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 KLRK1P26718 216 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 PTPN14Q15678 1187 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 PDCL2Q8N4E4 241 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 KRI1Q8N9T8 703 aaKnown RBP13.44□□□□□ -0.26
RBM28-202ENST00000415472 FANCBQ8NB91 859 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 CCDC112Q8NEF3 446 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 FBXO2Q9UK22 296 aaPredicted RBP13.44□□□□□ -0.26
RBM28-202ENST00000415472 NID2Q14112 1375 aa13.44□□□□□ -0.26
RBM28-202ENST00000415472 GNAT2P19087 354 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 GSDMDP57764 484 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 SEC23AQ15436 765 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 ZNF827Q17R98 1081 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
RBM28-202ENST00000415472 CNNM3Q8NE01 707 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 RIOK1Q9BRS2 568 aaKnown RBP13.43□□□□□ -0.26
RBM28-202ENST00000415472 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 PAXBP1Q9Y5B6 917 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 ZNF804BA4D1E1 1349 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 TNKSO95271 1327 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 WNT7AO00755 349 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 IKBKBO14920 756 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
RBM28-202ENST00000415472 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.43□□□□□ -0.26
RBM28-202ENST00000415472 V9GYY5 206 aaPredicted RBP13.43□□□□□ -0.26
RBM28-202ENST00000415472 CACNA1SQ13698 1873 aa13.43□□□□□ -0.26
RBM28-202ENST00000415472 MAGEB6P1A0A0J9YX57 407 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 CBX1P83916 185 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 BICDL1Q6ZP65 573 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 TRIM22Q8IYM9 498 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 ENAHQ8N8S7 591 aaPredicted RBP13.42□□□□□ -0.26
RBM28-202ENST00000415472 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 RREB1Q92766 1687 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 MYH6P13533 1939 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 POLR2DO15514 142 aaKnown RBP13.42□□□□□ -0.26
RBM28-202ENST00000415472 PTPREP23469 700 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 MYL5Q02045 173 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
RBM28-202ENST00000415472 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 PDILTQ8N807 584 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 UBAC1Q9BSL1 405 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 VPS54Q9P1Q0 977 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 SERTAD1Q9UHV2 236 aa13.42□□□□□ -0.26
RBM28-202ENST00000415472 ZNF215Q9UL58 517 aaPredicted RBP13.42□□□□□ -0.26
RBM28-202ENST00000415472 ERICH2A1L162 156 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 PLEKHA8P1O95397 391 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 DEXIO95424 95 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
RBM28-202ENST00000415472 FMR1Q06787 632 aaKnown RBP eCLIP13.41□□□□□ -0.26
RBM28-202ENST00000415472 PKN1Q16512 942 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms