RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ZNF592Q92610 1267 aa18.29■□□□□ 0.52
HOXD3-202ENST00000410016 PTPREP23469 700 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 MYL5Q02045 173 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 GRIN1Q05586 938 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 PPARAQ07869 468 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 NAA30Q147X3 362 aaPredicted RBP18.28■□□□□ 0.52
HOXD3-202ENST00000410016 TRIM22Q8IYM9 498 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 FANCBQ8NB91 859 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 CNNM3Q8NE01 707 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 TOMM22Q9NS69 142 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 ZNF804BA4D1E1 1349 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 DEXIO95424 95 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 SPECC1Q5M775 1068 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 CCDC82Q8N4S0 544 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 ACSBG1Q96GR2 724 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 FBXO2Q9UK22 296 aaPredicted RBP18.28■□□□□ 0.52
HOXD3-202ENST00000410016 BCORQ6W2J9 1755 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 COL16A1Q07092 1604 aaPredicted RBP18.28■□□□□ 0.52
HOXD3-202ENST00000410016 DOT1LQ8TEK3 1739 aa18.28■□□□□ 0.52
HOXD3-202ENST00000410016 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 SMIM22K7EJ46 135 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 FOXN1O15353 648 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 CYP7A1P22680 504 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 SFPQP23246 707 aaKnown RBP eCLIP18.27■□□□□ 0.52
HOXD3-202ENST00000410016 KCNJ6P48051 423 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 SAFBQ15424 915 aaKnown RBP eCLIP18.27■□□□□ 0.52
HOXD3-202ENST00000410016 SEC23AQ15436 765 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 RILPL1Q5EBL4 403 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 ZNF654Q8IZM8 581 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 DPF2Q92785 391 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
HOXD3-202ENST00000410016 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
HOXD3-202ENST00000410016 ANAPC4Q9UJX5 808 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 COL4A1P02462 1669 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 CCDC196A0A1B0GTZ2 297 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
HOXD3-202ENST00000410016 NR5A1Q13285 461 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 DDB1Q16531 1140 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
HOXD3-202ENST00000410016 IQSEC3Q9UPP2 1182 aaPredicted RBP18.27■□□□□ 0.52
HOXD3-202ENST00000410016 CHD4Q14839 1912 aa18.27■□□□□ 0.51
HOXD3-202ENST00000410016 ERICH2A1L162 156 aa18.26■□□□□ 0.51
HOXD3-202ENST00000410016 MARCH10Q8NA82 808 aaPredicted RBP18.26■□□□□ 0.51
HOXD3-202ENST00000410016 SPATA31A1Q5TZJ5 1347 aa18.26■□□□□ 0.51
HOXD3-202ENST00000410016 UBASH3AP57075 661 aa18.26■□□□□ 0.51
HOXD3-202ENST00000410016 DHX8Q14562 1220 aaKnown RBP18.26■□□□□ 0.51
HOXD3-202ENST00000410016 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
HOXD3-202ENST00000410016 RIOK1Q9BRS2 568 aaKnown RBP18.26■□□□□ 0.51
HOXD3-202ENST00000410016 PCDHB6Q9Y5E3 794 aa18.26■□□□□ 0.51
HOXD3-202ENST00000410016 MYH14Q7Z406 1995 aaKnown RBP18.25■□□□□ 0.51
HOXD3-202ENST00000410016 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
HOXD3-202ENST00000410016 PDE4BQ07343 736 aa18.25■□□□□ 0.51
HOXD3-202ENST00000410016 NT5DC1Q5TFE4 455 aa18.25■□□□□ 0.51
HOXD3-202ENST00000410016 OXER1Q8TDS5 423 aa18.25■□□□□ 0.51
HOXD3-202ENST00000410016 FANCLQ9NW38 375 aa18.25■□□□□ 0.51
HOXD3-202ENST00000410016 SARSP49591 514 aaKnown RBP18.25■□□□□ 0.51
HOXD3-202ENST00000410016 ZNF579Q8NAF0 562 aaKnown RBP18.25■□□□□ 0.51
HOXD3-202ENST00000410016 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
HOXD3-202ENST00000410016 PPP1R13BQ96KQ4 1090 aa18.25■□□□□ 0.51
HOXD3-202ENST00000410016 MINDY4BA8MYZ0 360 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 GYG1P46976 350 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 KIF18AQ8NI77 898 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 UBAC1Q9BSL1 405 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 RREB1Q92766 1687 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 KIF2AO00139 706 aaPredicted RBP18.24■□□□□ 0.51
HOXD3-202ENST00000410016 MYO1BO43795 1136 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 OLFM4Q6UX06 510 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 C3orf67Q6ZVT6 689 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
HOXD3-202ENST00000410016 TMX1Q9H3N1 280 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
HOXD3-202ENST00000410016 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
HOXD3-202ENST00000410016 SRPRBQ9Y5M8 271 aaKnown RBP18.24■□□□□ 0.51
HOXD3-202ENST00000410016 TNKSO95271 1327 aa18.24■□□□□ 0.51
HOXD3-202ENST00000410016 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 A0A0G2JS52 829 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 POLR2DO15514 142 aaKnown RBP18.23■□□□□ 0.51
HOXD3-202ENST00000410016 FUT2Q10981 343 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 PPP2R5BQ15173 497 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 ESR2Q92731 530 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
HOXD3-202ENST00000410016 MAN1B1Q9UKM7 699 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 COL1A1P02452 1464 aaPredicted RBP18.23■□□□□ 0.51
HOXD3-202ENST00000410016 WNK3Q9BYP7 1800 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 SERPINC1P01008 464 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 UBE4AQ14139 1066 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 POSTNQ15063 836 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 PKN1Q16512 942 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 VSTM4Q8IW00 320 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 SMAP1Q8IYB5 467 aaPredicted RBP18.23■□□□□ 0.51
HOXD3-202ENST00000410016 ENAHQ8N8S7 591 aaPredicted RBP18.23■□□□□ 0.51
HOXD3-202ENST00000410016 ZNF384Q8TF68 577 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 INTS13Q9NVM9 706 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 RAI14Q9P0K7 980 aa18.23■□□□□ 0.51
HOXD3-202ENST00000410016 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
HOXD3-202ENST00000410016 CABP5Q9NP86 173 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms