RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CASC4Q6P4E1 433 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 ARMC2Q8NEN0 867 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 SPC25Q9HBM1 224 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 NAIPQ13075 1403 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 APOEP02649 317 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 SULT6B1Q6IMI4 303 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 RUSC2Q8N2Y8 1516 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 RILPL1Q5EBL4 403 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 HP1BP3Q5SSJ5 553 aaPredicted RBP9.28□□□□□ -0.92
CHD8-201ENST00000399982 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 ZFYVE1Q9HBF4 777 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 IGF1RP08069 1367 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
CHD8-201ENST00000399982 BTBD11A6QL63 1104 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 SLC8A3P57103 927 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 TSTA3Q13630 321 aaPredicted RBP9.27□□□□□ -0.92
CHD8-201ENST00000399982 KARSQ15046 597 aaKnown RBP9.27□□□□□ -0.92
CHD8-201ENST00000399982 HHATQ5VTY9 493 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 RNF217Q8TC41 542 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 KAT14Q9H8E8 782 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 BZW2Q9Y6E2 419 aaKnown RBP9.27□□□□□ -0.92
CHD8-201ENST00000399982 STK10O94804 968 aaKnown RBP9.27□□□□□ -0.92
CHD8-201ENST00000399982 CCDC184Q52MB2 194 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 MUM1L1Q5H9M0 696 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 MIS12Q9H081 205 aa9.27□□□□□ -0.92
CHD8-201ENST00000399982 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 ESYT2A0FGR8 921 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 FANCCQ00597 558 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 CCDC197Q8NCU1 140 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 RILPQ96NA2 401 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 TERF2Q15554 542 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 TMEM67Q5HYA8 995 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 HAUS4Q9H6D7 363 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 NLRP12P59046 1061 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 SF3A3Q12874 501 aaKnown RBP eCLIP9.27□□□□□ -0.932e-6■■□□□ 11.6
CHD8-201ENST00000399982 NXNQ6DKJ4 435 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 CNPY4Q8N129 248 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 ZBTB43O43298 467 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 LPXNO60711 386 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 CASP2P42575 452 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 AFMP43652 599 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 ALG1Q9BT22 464 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 OLA1Q9NTK5 396 aaKnown RBP9.27□□□□□ -0.93
CHD8-201ENST00000399982 WWC3Q9ULE0 1092 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 RNF123Q5XPI4 1314 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 ATP5HO75947 161 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 NSMCE1Q8WV22 266 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 TPX2Q9ULW0 747 aaKnown RBP9.27□□□□□ -0.93
CHD8-201ENST00000399982 DAAM1Q9Y4D1 1078 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 NUB1Q9Y5A7 615 aa9.27□□□□□ -0.93
CHD8-201ENST00000399982 DRP2Q13474 957 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 ALS2CLQ60I27 953 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 TADA2BQ86TJ2 420 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 NME8Q8N427 588 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 JPH4Q96JJ6 628 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 CABP2Q9NPB3 220 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 NOP53Q9NZM5 478 aaKnown RBP9.26□□□□□ -0.93
CHD8-201ENST00000399982 C6orf229H3BNL8 230 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 RGS16O15492 202 aaPredicted RBP9.26□□□□□ -0.93
CHD8-201ENST00000399982 PDE4BQ07343 736 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 BBOF1Q8ND07 529 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 FBXO18Q8NFZ0 1043 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 LIG3P49916 1009 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 PLCD1P51178 756 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 SKA2Q8WVK7 121 aaPredicted RBP9.26□□□□□ -0.93
CHD8-201ENST00000399982 N4BP2L2Q92802 583 aaPredicted RBP9.26□□□□□ -0.93
CHD8-201ENST00000399982 BRF1Q92994 677 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 RMDN2Q96LZ7 410 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 LMBRD1Q9NUN5 540 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 HAUS2Q9NVX0 235 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 SPDYE2BA6NHP3 402 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 SPDYE6P0CI01 402 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 PPP2R5BQ15173 497 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 KRT71Q3SY84 523 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 PALM2Q8IXS6 379 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 USP26Q9BXU7 913 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 DCTPP1Q9H773 170 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 SLC9C1Q4G0N8 1177 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 TRIML1Q8N9V2 468 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 BAG5Q9UL15 447 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.26□□□□□ -0.93
CHD8-201ENST00000399982 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 NUP160Q12769 1436 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.26□□□□□ -0.935e-31■■■■■ 385.3
CHD8-201ENST00000399982 ANKRD20A4Q4UJ75 823 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 ANKRD20A8PQ5CZ79 823 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 ANKRD20A2Q5SQ80 823 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 ANKRD20A1Q5TYW2 823 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 SND1Q7KZF4 910 aaKnown RBP eCLIP9.26□□□□□ -0.93
CHD8-201ENST00000399982 CBX8Q9HC52 389 aa9.26□□□□□ -0.93
CHD8-201ENST00000399982 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
CHD8-201ENST00000399982 FOXD4Q12950 439 aaPredicted RBP9.25□□□□□ -0.93
CHD8-201ENST00000399982 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms