RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
FAM3B-204ENST00000398652 PRDX5P30044 214 aa17.3■□□□□ 0.36
FAM3B-204ENST00000398652 RGS3P49796 1198 aa17.3■□□□□ 0.36
FAM3B-204ENST00000398652 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
FAM3B-204ENST00000398652 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
FAM3B-204ENST00000398652 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
FAM3B-204ENST00000398652 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
FAM3B-204ENST00000398652 SH3BP5LQ7L8J4 393 aa17.29■□□□□ 0.36
FAM3B-204ENST00000398652 ZSCAN29Q8IWY8 852 aaPredicted RBP17.29■□□□□ 0.36
FAM3B-204ENST00000398652 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
FAM3B-204ENST00000398652 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
FAM3B-204ENST00000398652 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
FAM3B-204ENST00000398652 LAMA2P24043 3122 aaKnown RBP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 UTYO14607 1347 aa17.28■□□□□ 0.36
FAM3B-204ENST00000398652 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 PABPC4Q13310 644 aaKnown RBP eCLIP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
FAM3B-204ENST00000398652 CCDC84Q86UT8 332 aaPredicted RBP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 CDX2Q99626 313 aaPredicted RBP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
FAM3B-204ENST00000398652 XRCC5P13010 732 aaKnown RBP17.27■□□□□ 0.36
FAM3B-204ENST00000398652 SLC5A1P13866 664 aa17.27■□□□□ 0.36
FAM3B-204ENST00000398652 CYP2B6P20813 491 aa17.27■□□□□ 0.36
FAM3B-204ENST00000398652 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
FAM3B-204ENST00000398652 SALL1Q9NSC2 1324 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 DDTLA6NHG4 134 aaPredicted RBP17.26■□□□□ 0.35
FAM3B-204ENST00000398652 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 KLHDC4Q8TBB5 520 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 SOCS4Q8WXH5 440 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 LPIN2Q92539 896 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 SYMPKQ92797 1274 aaKnown RBP17.26■□□□□ 0.35
FAM3B-204ENST00000398652 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 PRUNE2Q8WUY3 3088 aa17.26■□□□□ 0.35
FAM3B-204ENST00000398652 GAKO14976 1311 aa17.25■□□□□ 0.35
FAM3B-204ENST00000398652 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
FAM3B-204ENST00000398652 SPP2Q13103 211 aa17.25■□□□□ 0.35
FAM3B-204ENST00000398652 LHX8Q68G74 356 aa17.25■□□□□ 0.35
FAM3B-204ENST00000398652 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
FAM3B-204ENST00000398652 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
FAM3B-204ENST00000398652 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
FAM3B-204ENST00000398652 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
FAM3B-204ENST00000398652 COL9A1P20849 921 aa17.24■□□□□ 0.35
FAM3B-204ENST00000398652 HMGCS2P54868 508 aa17.24■□□□□ 0.35
FAM3B-204ENST00000398652 CACNB2Q08289 660 aaPredicted RBP17.24■□□□□ 0.35
FAM3B-204ENST00000398652 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
FAM3B-204ENST00000398652 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
FAM3B-204ENST00000398652 CDH23Q9H251 3354 aa17.24■□□□□ 0.35
FAM3B-204ENST00000398652 TBC1D12O60347 775 aa17.23■□□□□ 0.35
FAM3B-204ENST00000398652 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
FAM3B-204ENST00000398652 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
FAM3B-204ENST00000398652 DDX4Q9NQI0 724 aaKnown RBP17.23■□□□□ 0.35
FAM3B-204ENST00000398652 RLFQ13129 1914 aa17.23■□□□□ 0.35
FAM3B-204ENST00000398652 PICALMQ13492 652 aa17.22■□□□□ 0.35
FAM3B-204ENST00000398652 OSBPL5Q9H0X9 879 aaPredicted RBP17.22■□□□□ 0.35
FAM3B-204ENST00000398652 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
FAM3B-204ENST00000398652 EYA2O00167 538 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 SEMA3EO15041 775 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 SH3D19Q5HYK7 790 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
FAM3B-204ENST00000398652 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 PRKAG2Q9UGJ0 569 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
FAM3B-204ENST00000398652 MUC3AQ02505 3323 aa17.21■□□□□ 0.34
FAM3B-204ENST00000398652 FAM196BA6NMK8 535 aa17.2■□□□□ 0.34
FAM3B-204ENST00000398652 FOSL2P15408 326 aa17.2■□□□□ 0.34
FAM3B-204ENST00000398652 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
FAM3B-204ENST00000398652 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
FAM3B-204ENST00000398652 GPRC5AQ8NFJ5 357 aa17.2■□□□□ 0.34
FAM3B-204ENST00000398652 USP6NLQ92738 828 aa17.2■□□□□ 0.34
FAM3B-204ENST00000398652 SENP6Q9GZR1 1112 aaPredicted RBP17.2■□□□□ 0.34
FAM3B-204ENST00000398652 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
FAM3B-204ENST00000398652 DNAH12Q6ZR08 3092 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 MAPK4P31152 587 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 RGS2P41220 211 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 BTDP43251 543 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 CCL14Q16627 93 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
FAM3B-204ENST00000398652 SLF2Q8IX21 1173 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 APBA2Q99767 749 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
FAM3B-204ENST00000398652 TXNRD2Q9NNW7 524 aa17.19■□□□□ 0.34
FAM3B-204ENST00000398652 NCOR1O75376 2440 aa17.18■□□□□ 0.34
FAM3B-204ENST00000398652 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
FAM3B-204ENST00000398652 SMAD3P84022 425 aaKnown RBP17.18■□□□□ 0.34
FAM3B-204ENST00000398652 SHHQ15465 462 aa17.18■□□□□ 0.34
FAM3B-204ENST00000398652 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
FAM3B-204ENST00000398652 FAM163AQ96GL9 167 aaPredicted RBP17.18■□□□□ 0.34
FAM3B-204ENST00000398652 AS3MTQ9HBK9 375 aa17.18■□□□□ 0.34
FAM3B-204ENST00000398652 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 TNFRSF10AO00220 468 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 PEX10O60683 326 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
FAM3B-204ENST00000398652 CAP2P40123 477 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
FAM3B-204ENST00000398652 HERVK_113P62684 666 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
FAM3B-204ENST00000398652 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms