RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 HERC5Q9UII4 1024 aaKnown RBP16.73■□□□□ 0.27
CXCL12-205ENST00000395794 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-205ENST00000395794 PDHXO00330 501 aa16.72■□□□□ 0.27
CXCL12-205ENST00000395794 RGS19P49795 217 aa16.72■□□□□ 0.27
CXCL12-205ENST00000395794 ADGRA1Q86SQ6 560 aa16.72■□□□□ 0.27
CXCL12-205ENST00000395794 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
CXCL12-205ENST00000395794 MAGEB6Q8N7X4 407 aa16.72■□□□□ 0.27
CXCL12-205ENST00000395794 SOX10P56693 466 aa16.71■□□□□ 0.27
CXCL12-205ENST00000395794 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
CXCL12-205ENST00000395794 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
CXCL12-205ENST00000395794 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
CXCL12-205ENST00000395794 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 USP5P45974 858 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 GADL1Q6ZQY3 521 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-205ENST00000395794 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
CXCL12-205ENST00000395794 PARK7Q99497 189 aaKnown RBP16.7■□□□□ 0.26
CXCL12-205ENST00000395794 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
CXCL12-205ENST00000395794 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 PTPN22Q9Y2R2 807 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 AFG3L2Q9Y4W6 797 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 FLT1P17948 1338 aa16.7■□□□□ 0.26
CXCL12-205ENST00000395794 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
CXCL12-205ENST00000395794 A0A0G2JLL6 359 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-205ENST00000395794 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
CXCL12-205ENST00000395794 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
CXCL12-205ENST00000395794 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
CXCL12-205ENST00000395794 PRRT2Q7Z6L0 340 aaPredicted RBP16.69■□□□□ 0.26
CXCL12-205ENST00000395794 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
CXCL12-205ENST00000395794 GOLIM4O00461 696 aa16.68■□□□□ 0.26
CXCL12-205ENST00000395794 CAP2P40123 477 aa16.68■□□□□ 0.26
CXCL12-205ENST00000395794 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
CXCL12-205ENST00000395794 AS3MTQ9HBK9 375 aa16.68■□□□□ 0.26
CXCL12-205ENST00000395794 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
CXCL12-205ENST00000395794 CPA4Q9UI42 421 aa16.68■□□□□ 0.26
CXCL12-205ENST00000395794 PALD1Q9ULE6 856 aa16.68■□□□□ 0.26
CXCL12-205ENST00000395794 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
CXCL12-205ENST00000395794 GNRH1P01148 92 aa16.67■□□□□ 0.26
CXCL12-205ENST00000395794 LACTBP83111 547 aaPredicted RBP16.67■□□□□ 0.26
CXCL12-205ENST00000395794 MOGSQ13724 837 aa16.67■□□□□ 0.26
CXCL12-205ENST00000395794 ZNF280CQ8ND82 737 aa16.67■□□□□ 0.26
CXCL12-205ENST00000395794 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
CXCL12-205ENST00000395794 MAGEB6P1A0A0J9YX57 407 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 ASNSP08243 561 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 ATP5JP18859 108 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 SPP2Q13103 211 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 GPAT2Q6NUI2 795 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 C17orf99Q6UX52 265 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
CXCL12-205ENST00000395794 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
CXCL12-205ENST00000395794 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.66■□□□□ 0.26
CXCL12-205ENST00000395794 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-205ENST00000395794 CYP2C8P10632 490 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 PDE6AP16499 860 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 HOXD10P28358 340 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 PRMT2P55345 433 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 PABPC4Q13310 644 aaKnown RBP eCLIP16.65■□□□□ 0.26
CXCL12-205ENST00000395794 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 CCDC84Q86UT8 332 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-205ENST00000395794 SMCR8Q8TEV9 937 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-205ENST00000395794 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
CXCL12-205ENST00000395794 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 PAG1Q9NWQ8 432 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
CXCL12-205ENST00000395794 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
CXCL12-205ENST00000395794 PSMC4P43686 418 aa16.64■□□□□ 0.25
CXCL12-205ENST00000395794 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.25
CXCL12-205ENST00000395794 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
CXCL12-205ENST00000395794 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
CXCL12-205ENST00000395794 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-205ENST00000395794 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
CXCL12-205ENST00000395794 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
CXCL12-205ENST00000395794 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
CXCL12-205ENST00000395794 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-205ENST00000395794 HAUS7Q99871 368 aa16.63■□□□□ 0.25
CXCL12-205ENST00000395794 ARHGAP39Q9C0H5 1083 aa16.63■□□□□ 0.25
CXCL12-205ENST00000395794 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
CXCL12-205ENST00000395794 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
CXCL12-205ENST00000395794 SERPINB13Q9UIV8 391 aa16.63■□□□□ 0.25
CXCL12-205ENST00000395794 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
CXCL12-205ENST00000395794 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
CXCL12-205ENST00000395794 POLR3DP05423 398 aaPredicted RBP16.62■□□□□ 0.25
CXCL12-205ENST00000395794 OSBPP22059 807 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 HMGCS2P54868 508 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 FCGRTP55899 365 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
CXCL12-205ENST00000395794 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
CXCL12-205ENST00000395794 ZSCAN25Q6NSZ9 544 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 ARMC5Q96C12 935 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
CXCL12-205ENST00000395794 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
CXCL12-205ENST00000395794 GDF11O95390 407 aa16.61■□□□□ 0.25
CXCL12-205ENST00000395794 CAP1Q01518 475 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms