RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SDF4Q9BRK5 362 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 ASAP1Q9ULH1 1129 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 HPS5Q9UPZ3 1129 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 AXIN2Q9Y2T1 843 aa4.21□□□□□ -1.74
XRN1-202ENST00000392981 KHNYNO15037 678 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 AP1G1O43747 822 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 MICAL2O94851 1124 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 NBPF1Q3BBV0 1214 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 TMEM67Q5HYA8 995 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 HSH2DQ96JZ2 352 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 RUSC1Q9BVN2 902 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 SPATA9Q9BWV2 254 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 VPS45Q9NRW7 570 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CDV3Q9UKY7 258 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 INVSQ9Y283 1065 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CTNND1O60716 968 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 PMLP29590 882 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CDC25BP30305 580 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 GNASQ5JWF2 1037 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 EHBP1Q8NDI1 1231 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CNKSR1Q969H4 720 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CFHR5Q9BXR6 569 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CEP44Q9C0F1 390 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 COLQQ9Y215 455 aaPredicted RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 EREGO14944 169 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 U2AF1L5P0DN76 240 aaPredicted RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 U2AF1Q01081 240 aaKnown RBP eCLIP4.2□□□□□ -1.74
XRN1-202ENST00000392981 GRM2Q14416 872 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 STAT4Q14765 748 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CCDC93Q567U6 631 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 FAM209AQ5JX71 171 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 KANK3Q6NY19 840 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 STRA8Q7Z7C7 330 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 RASGRP4Q8TDF6 673 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 C2orf49Q9BVC5 232 aaPredicted RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 NOC4LQ9BVI4 516 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 NLRC4Q9NPP4 1024 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 ZMYM5Q9UJ78 669 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 PCDHB14Q9Y5E9 798 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CFAP69A5D8W1 941 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 PABPN1LA6NDY0 278 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 M0R2N6 131 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 ACTN4O43707 911 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 SNX2O60749 519 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 TATP17735 454 aaPredicted RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 HLTFQ14527 1009 aaKnown RBP eCLIP4.2□□□□□ -1.74
XRN1-202ENST00000392981 INTS6LQ5JSJ4 861 aaKnown RBP4.2□□□□□ -1.74
XRN1-202ENST00000392981 FAM102BQ5T8I3 360 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 PCGF5Q86SE9 256 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 GRAMD1CQ8IYS0 662 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 RSRP1Q9BUV0 290 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 CASS4Q9NQ75 786 aa4.2□□□□□ -1.74
XRN1-202ENST00000392981 GAS7O60861 476 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 CRKP46108 304 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 RTN1Q16799 776 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 KIAA0753Q2KHM9 967 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 ERMP1Q7Z2K6 904 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 LRP10Q7Z4F1 713 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 SPATS2Q86XZ4 545 aaKnown RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 CCDC33Q8N5R6 958 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 MSL3Q8N5Y2 521 aaKnown RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 MAGEB6Q8N7X4 407 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 GRPEL1Q9HAV7 217 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 HELLSQ9NRZ9 838 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 F13A1P00488 732 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 FAM83BQ5T0W9 1011 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 EP400NLQ6ZTU2 488 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 FAM47EQ6ZV65 393 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 PJA1Q8NG27 643 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 TBC1D31Q96DN5 1066 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 BARD1Q99728 777 aaKnown RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 NIFKQ9BYG3 293 aaKnown RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 ASPSCR1Q9BZE9 553 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 LATS2Q9NRM7 1088 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 E2F8A0AVK6 867 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 hCG_1984214I3L0E3 225 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 SETSIPP0DME0 302 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 SEPT2Q15019 361 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 CCDC91Q7Z6B0 441 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 ILDR1Q86SU0 546 aaPredicted RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 ZSCAN30Q86W11 494 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 MYCT1Q8N699 235 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 PPM1NQ8N819 430 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 TTC17Q96AE7 1141 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 ZFYVE28Q9HCC9 887 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 PIP5K1CO60331 668 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 HMMRO75330 724 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 EDN3P14138 238 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 SMTNP53814 917 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 SCAND1P57086 179 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 CENPCQ03188 943 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 RNF219Q5W0B1 726 aaPredicted RBP4.19□□□□□ -1.74
XRN1-202ENST00000392981 BRICD5Q6PL45 260 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 CATIPQ7Z7H3 387 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 PPM1KQ8N3J5 372 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 LRRN4CLQ8ND94 238 aa4.19□□□□□ -1.74
XRN1-202ENST00000392981 MGARPQ8TDB4 240 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms