RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 KRT79Q5XKE5 535 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 NIM1KQ8IY84 436 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 BSDC1Q9NW68 430 aaPredicted RBP18.78■□□□□ 0.6
SNX9-201ENST00000392185 MINPP1Q9UNW1 487 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 POLR2DO15514 142 aaKnown RBP18.78■□□□□ 0.6
SNX9-201ENST00000392185 PYM1Q9BRP8 204 aaKnown RBP18.78■□□□□ 0.6
SNX9-201ENST00000392185 PKD2L1Q9P0L9 805 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 KCNH3Q9ULD8 1083 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 ARID4AP29374 1257 aaPredicted RBP18.78■□□□□ 0.6
SNX9-201ENST00000392185 JCADQ9P266 1359 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 UQCRHLA0A096LP55 91 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 UQCRHP07919 91 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 PRDX5P30044 214 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 GPS2Q13227 327 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 APOA5Q6Q788 366 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
SNX9-201ENST00000392185 CERKQ8TCT0 537 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 CNKSR1Q969H4 720 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 INCENPQ9NQS7 918 aa18.78■□□□□ 0.6
SNX9-201ENST00000392185 MRPL12P52815 198 aaKnown RBP18.77■□□□□ 0.6
SNX9-201ENST00000392185 ATL3Q6DD88 541 aa18.77■□□□□ 0.6
SNX9-201ENST00000392185 IQUBQ8NA54 791 aa18.77■□□□□ 0.6
SNX9-201ENST00000392185 LUC7LQ9NQ29 371 aaKnown RBP18.77■□□□□ 0.6
SNX9-201ENST00000392185 ITPK1Q13572 414 aa18.77■□□□□ 0.6
SNX9-201ENST00000392185 TDRD12Q587J7 1177 aaKnown RBP18.77■□□□□ 0.6
SNX9-201ENST00000392185 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
SNX9-201ENST00000392185 MAPK8IP1Q9UQF2 711 aa18.77■□□□□ 0.6
SNX9-201ENST00000392185 SP4Q02446 784 aa18.77■□□□□ 0.59
SNX9-201ENST00000392185 TTC38Q5R3I4 469 aa18.77■□□□□ 0.59
SNX9-201ENST00000392185 ATG9AQ7Z3C6 839 aa18.77■□□□□ 0.59
SNX9-201ENST00000392185 RABL6Q3YEC7 729 aaPredicted RBP18.76■□□□□ 0.59
SNX9-201ENST00000392185 ZNF397Q8NF99 534 aaPredicted RBP18.76■□□□□ 0.59
SNX9-201ENST00000392185 DNA2P51530 1060 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 GRM1Q13255 1194 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 GRAPQ13588 217 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 ERMNQ8TAM6 284 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
SNX9-201ENST00000392185 ZSWIM5Q9P217 1185 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 TXKP42681 527 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 MST1RQ04912 1400 aa18.76■□□□□ 0.59
SNX9-201ENST00000392185 TCP10L2B9ZVM9 353 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 URI1O94763 535 aaPredicted RBP18.75■□□□□ 0.59
SNX9-201ENST00000392185 TNNT1P13805 278 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 CUL4AQ13619 759 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 USH1GQ495M9 461 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 SCLT1Q96NL6 688 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 TBCAO75347 108 aaKnown RBP18.75■□□□□ 0.59
SNX9-201ENST00000392185 ZNF202O95125 648 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 NFIXQ14938 502 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 SUPT20HQ8NEM7 779 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 STRBPQ96SI9 672 aaKnown RBP18.75■□□□□ 0.59
SNX9-201ENST00000392185 ATP8A2Q9NTI2 1148 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 ELP1O95163 1332 aa18.75■□□□□ 0.59
SNX9-201ENST00000392185 KIF20AO95235 890 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 MECOMQ03112 1051 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 TRAF1Q13077 416 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 TXNRD1Q16881 649 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 SYCP3Q8IZU3 236 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 MMRN2Q9H8L6 949 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 IFNKQ9P0W0 207 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
SNX9-201ENST00000392185 FGFR1OPO95684 399 aaKnown RBP18.74■□□□□ 0.59
SNX9-201ENST00000392185 NSUN7Q8NE18 718 aaKnown RBP18.74■□□□□ 0.59
SNX9-201ENST00000392185 FBXO18Q8NFZ0 1043 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 RMND1Q9NWS8 449 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
SNX9-201ENST00000392185 PSMA7O14818 248 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 GPKOWQ92917 476 aaPredicted RBP eCLIP18.74■□□□□ 0.592e-6■■■■□ 23.7
SNX9-201ENST00000392185 DYNLL2Q96FJ2 89 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
SNX9-201ENST00000392185 FTOQ9C0B1 505 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNX9-201ENST00000392185 FER1L4A9Z1Z3 1794 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 CCNT1O60563 726 aaKnown RBP18.73■□□□□ 0.59
SNX9-201ENST00000392185 GSDMDP57764 484 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 VPS72Q15906 364 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 AIFM3Q96NN9 605 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 MEGF6O75095 1541 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 KLRF2D3W0D1 207 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 COL3A1P02461 1466 aaPredicted RBP18.73■□□□□ 0.59
SNX9-201ENST00000392185 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 PPP2R5BQ15173 497 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 RIPOR2Q9Y4F9 1068 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 ZMYM6O95789 1325 aa18.73■□□□□ 0.59
SNX9-201ENST00000392185 RAD17O75943 681 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 SKILP12757 684 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 CCDC181Q5TID7 509 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 WWC2Q6AWC2 1192 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 SEMA3EO15041 775 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 SPA17Q15506 151 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 CLSTN2Q9H4D0 955 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 ARHGEF10LQ9HCE6 1279 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 GJB4Q9NTQ9 266 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
SNX9-201ENST00000392185 NR1I2O75469 434 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms