RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 KCPQ6ZWJ8 1503 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 RAB3GAP1Q15042 981 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 SPA17Q15506 151 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 BBXQ8WY36 941 aaPredicted RBP6.32□□□□□ -1.4
GEN1-202ENST00000381254 PSMD1Q99460 953 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 PNMA2Q9UL42 364 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 SEMA3FQ13275 785 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 CCDC102BQ68D86 513 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 AACSQ86V21 672 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 LUZP1Q86V48 1076 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 ZNF592Q92610 1267 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 ALS2CR12Q96Q35 445 aa6.32□□□□□ -1.4
GEN1-202ENST00000381254 TBC1D8O95759 1140 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 CALML3P27482 149 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 SH3BGRP55822 239 aaPredicted RBP6.31□□□□□ -1.4
GEN1-202ENST00000381254 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 PODNQ7Z5L7 613 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 RGS22Q8NE09 1264 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 CCDC155Q8N6L0 562 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 C8orf76Q96K31 380 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 LRRC4BQ9NT99 713 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 LRP2BPQ9P2M1 347 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 LEMD3Q9Y2U8 911 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 PDE8AO60658 829 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 ZNF445P59923 1031 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 ZSCAN22P10073 491 aaPredicted RBP6.31□□□□□ -1.4
GEN1-202ENST00000381254 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
GEN1-202ENST00000381254 GTF2IP78347 998 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 CEP112Q8N8E3 955 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 TNPO1Q92973 898 aaKnown RBP6.31□□□□□ -1.4
GEN1-202ENST00000381254 DNAJC2Q99543 621 aaKnown RBP6.31□□□□□ -1.4
GEN1-202ENST00000381254 RNF216Q9NWF9 866 aaPredicted RBP6.31□□□□□ -1.4
GEN1-202ENST00000381254 A1BGP04217 495 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 KCNJ6P48051 423 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 NBPF9Q3BBW0 867 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 AXDND1Q5T1B0 1012 aaPredicted RBP6.31□□□□□ -1.4
GEN1-202ENST00000381254 COA1Q9GZY4 146 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 AP5M1Q9H0R1 490 aa6.31□□□□□ -1.4
GEN1-202ENST00000381254 TCP10L2B9ZVM9 353 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 TOP1P11387 765 aaKnown RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 PAGR1Q9BTK6 254 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 CHD2O14647 1828 aaKnown RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 GPR25O00155 361 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 CLSTN1O94985 981 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 PPP2R5EQ16537 467 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 GIGYF2Q6Y7W6 1299 aaKnown RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 C7orf61Q8IZ16 206 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 FAM177A1Q8N128 213 aaPredicted RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 LMBR1Q8WVP7 490 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 ELP3Q9H9T3 547 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 FOXD4L1Q9NU39 408 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 GPRC5DQ9NZD1 345 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 IMPACTQ9P2X3 320 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 CNPY2Q9Y2B0 182 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 MAP3K15Q6ZN16 1313 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 MYPNQ86TC9 1320 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 GCOM1H8Y6P7 765 aaPredicted RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 ATP8B1O43520 1251 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 MYZAPP0CAP1 466 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 GABPB1Q06547 395 aaPredicted RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 OTUD5Q96G74 571 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 ABCF2Q9UG63 623 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 SPATA31E1Q6ZUB1 1445 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 POLRMTO00411 1230 aaKnown RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 HCLS1P14317 486 aaPredicted RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 KRT83P78385 493 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 SMC1AQ14683 1233 aaKnown RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 NCOA7Q8NI08 942 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 DPF2Q92785 391 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 HMX1Q9NP08 348 aaPredicted RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 RNF186Q9NXI6 227 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 LRP5O75197 1615 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 CYLC1P35663 651 aaPredicted RBP6.3□□□□□ -1.4
GEN1-202ENST00000381254 SLAIN1Q8ND83 568 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 CDCA5Q96FF9 252 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 ZBTB40Q9NUA8 1239 aa6.3□□□□□ -1.4
GEN1-202ENST00000381254 ATP6V0A2Q9Y487 856 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 UQCRHLA0A096LP55 91 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 UQCRHP07919 91 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
GEN1-202ENST00000381254 ZNF165P49910 485 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 KSR2Q6VAB6 950 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 LDHAL6AQ6ZMR3 332 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 KRT222Q8N1A0 295 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 CCDC51Q96ER9 411 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 WBP1LQ9NX94 342 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 HPS5Q9UPZ3 1129 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 SPOUT1Q5T280 376 aaKnown RBP6.29□□□□□ -1.4
GEN1-202ENST00000381254 ZNF496Q96IT1 587 aaPredicted RBP6.29□□□□□ -1.4
GEN1-202ENST00000381254 FTOQ9C0B1 505 aaKnown RBP eCLIP6.29□□□□□ -1.4
GEN1-202ENST00000381254 RTL9Q8NET4 1388 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 RHPN1Q8TCX5 695 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 MRPS27Q92552 414 aaKnown RBP6.29□□□□□ -1.4
GEN1-202ENST00000381254 TTC14Q96N46 770 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 PCP11498 1178 aaKnown RBP6.29□□□□□ -1.4
GEN1-202ENST00000381254 BCAMP50895 628 aa6.29□□□□□ -1.4
GEN1-202ENST00000381254 PDE1AP54750 535 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms