RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.28
PRPF18-202ENST00000378572 TEX11Q8IYF3 940 aa16.77■□□□□ 0.28
PRPF18-202ENST00000378572 ZBTB22O15209 634 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 CTNND1O60716 968 aaKnown RBP16.76■□□□□ 0.27
PRPF18-202ENST00000378572 CTGFP29279 349 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 NSUN4Q96CB9 384 aaKnown RBP16.76■□□□□ 0.27
PRPF18-202ENST00000378572 SNRKQ9NRH2 765 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 ARID4AP29374 1257 aaPredicted RBP16.76■□□□□ 0.27
PRPF18-202ENST00000378572 GRK4P32298 578 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 MCAMP43121 646 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 RHBDL3P58872 404 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 PRKCZQ05513 592 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 SIRT2Q8IXJ6 389 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 AFG3L2Q9Y4W6 797 aa16.76■□□□□ 0.27
PRPF18-202ENST00000378572 MTFR1Q15390 333 aa16.75■□□□□ 0.27
PRPF18-202ENST00000378572 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
PRPF18-202ENST00000378572 HMMRO75330 724 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 BCRP11274 1271 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 UBXN2AP68543 259 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 NAA16Q6N069 864 aaPredicted RBP16.74■□□□□ 0.27
PRPF18-202ENST00000378572 SMC5Q8IY18 1101 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 ZNF384Q8TF68 577 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 TRIM34Q9BYJ4 488 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
PRPF18-202ENST00000378572 MAST2Q6P0Q8 1798 aa16.74■□□□□ 0.27
PRPF18-202ENST00000378572 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
PRPF18-202ENST00000378572 BRCA2P51587 3418 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 TNPO2O14787 897 aaKnown RBP16.73■□□□□ 0.27
PRPF18-202ENST00000378572 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
PRPF18-202ENST00000378572 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 SH3RF3Q8TEJ3 882 aaPredicted RBP16.73■□□□□ 0.27
PRPF18-202ENST00000378572 AATFQ9NY61 560 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRPF18-202ENST00000378572 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 BAG3O95817 575 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
PRPF18-202ENST00000378572 DBNDD2Q9BQY9 259 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 RNF208Q9H0X6 261 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
PRPF18-202ENST00000378572 PTPRFP10586 1907 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 MGAMO43451 1857 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 CCL5P13501 91 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 SLAIN1Q8ND83 568 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 SLC45A1Q9Y2W3 748 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 PHIPQ8WWQ0 1821 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
PRPF18-202ENST00000378572 TBC1D12O60347 775 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
PRPF18-202ENST00000378572 MAP3K10Q02779 954 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 SPP2Q13103 211 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 HABP4Q5JVS0 413 aaKnown RBP16.71■□□□□ 0.27
PRPF18-202ENST00000378572 TREML2Q5T2D2 321 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
PRPF18-202ENST00000378572 ANKRD13CQ8N6S4 541 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 NKX2-3Q8TAU0 364 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 GABRQQ9UN88 632 aa16.71■□□□□ 0.27
PRPF18-202ENST00000378572 COL2A1P02458 1487 aaPredicted RBP16.71■□□□□ 0.27
PRPF18-202ENST00000378572 PLCG2P16885 1265 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 MAPKAPK5Q8IW41 473 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 DPF3Q92784 378 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 DCTPP1Q9H773 170 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 ADCY3O60266 1144 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 HMGCS2P54868 508 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 PABPC4Q13310 644 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRPF18-202ENST00000378572 POLA2Q14181 598 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 TGFBRAP1Q8WUH2 860 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 COA7Q96BR5 231 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
PRPF18-202ENST00000378572 ELNP15502 786 aa16.69■□□□□ 0.26
PRPF18-202ENST00000378572 FLT3LGP49771 235 aa16.69■□□□□ 0.26
PRPF18-202ENST00000378572 PROCA1Q8NCQ7 364 aaPredicted RBP16.69■□□□□ 0.26
PRPF18-202ENST00000378572 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
PRPF18-202ENST00000378572 HERC5Q9UII4 1024 aaKnown RBP16.69■□□□□ 0.26
PRPF18-202ENST00000378572 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
PRPF18-202ENST00000378572 CAP2P40123 477 aa16.68■□□□□ 0.26
PRPF18-202ENST00000378572 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
PRPF18-202ENST00000378572 DHX36Q9H2U1 1008 aaKnown RBP16.68■□□□□ 0.26
PRPF18-202ENST00000378572 PI4KBQ9UBF8 816 aa16.68■□□□□ 0.26
PRPF18-202ENST00000378572 SAP30BPQ9UHR5 308 aaKnown RBP16.68■□□□□ 0.26
PRPF18-202ENST00000378572 IDH1O75874 414 aaKnown RBP16.67■□□□□ 0.26
PRPF18-202ENST00000378572 INHAP05111 366 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 ZAP70P43403 619 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
PRPF18-202ENST00000378572 UNC93B1Q9H1C4 597 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 FLT1P17948 1338 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 LOC285556D6RIA3 1793 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 H0YGN5 161 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 CYP2E1P05181 493 aaPredicted RBP16.67■□□□□ 0.26
PRPF18-202ENST00000378572 HLA-DOAP06340 250 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 GJB1P08034 283 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 GJA8P48165 433 aa16.67■□□□□ 0.26
PRPF18-202ENST00000378572 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms