RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 ZSCAN20P17040 1043 aaPredicted RBP12.59□□□□□ -0.39
BEST1-201ENST00000378043 RTN1Q16799 776 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 CRACR2BQ8N4Y2 399 aaPredicted RBP12.59□□□□□ -0.39
BEST1-201ENST00000378043 CNNM3Q8NE01 707 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
BEST1-201ENST00000378043 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
BEST1-201ENST00000378043 COL16A1Q07092 1604 aaPredicted RBP12.58□□□□□ -0.39
BEST1-201ENST00000378043 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
BEST1-201ENST00000378043 GNAT2P19087 354 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
BEST1-201ENST00000378043 KCNJ6P48051 423 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 NR5A1Q13285 461 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 WTAPQ15007 396 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 KIF18AQ8NI77 898 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 FANCLQ9NW38 375 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
BEST1-201ENST00000378043 NTSR2O95665 410 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 PTPREP23469 700 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 UBASH3AP57075 661 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 CHRNDQ07001 517 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 PKNOX2Q96KN3 472 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 NACAP1Q9BZK3 213 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 FOXP1Q9H334 677 aaPredicted RBP12.58□□□□□ -0.4
BEST1-201ENST00000378043 TOMM22Q9NS69 142 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
BEST1-201ENST00000378043 PCDHB6Q9Y5E3 794 aa12.58□□□□□ -0.4
BEST1-201ENST00000378043 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.4
BEST1-201ENST00000378043 RTL9Q8NET4 1388 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 LAMB2P55268 1798 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 TMEM232C9JQI7 657 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 CCDC152Q4G0S7 254 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 SDR42E1Q8WUS8 393 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 WASF1Q92558 559 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 PPARAQ07869 468 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 ITPK1Q13572 414 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 SEC23AQ15436 765 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
BEST1-201ENST00000378043 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 LRP2BPQ9P2M1 347 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.57□□□□□ -0.4
BEST1-201ENST00000378043 V9GYY5 206 aaPredicted RBP12.57□□□□□ -0.4
BEST1-201ENST00000378043 RREB1Q92766 1687 aa12.57□□□□□ -0.4
BEST1-201ENST00000378043 CACNA1SQ13698 1873 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 DEXIO95424 95 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
BEST1-201ENST00000378043 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 SERPINC1P01008 464 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
BEST1-201ENST00000378043 SARSP49591 514 aaKnown RBP12.56□□□□□ -0.4
BEST1-201ENST00000378043 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
BEST1-201ENST00000378043 NT5DC1Q5TFE4 455 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 MED15Q96RN5 788 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 L2HGDHQ9H9P8 463 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 MAN1B1Q9UKM7 699 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
BEST1-201ENST00000378043 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
BEST1-201ENST00000378043 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
BEST1-201ENST00000378043 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
BEST1-201ENST00000378043 KIF2AO00139 706 aaPredicted RBP12.55□□□□□ -0.4
BEST1-201ENST00000378043 POLR2DO15514 142 aaKnown RBP12.55□□□□□ -0.4
BEST1-201ENST00000378043 CYP7A1P22680 504 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 PARP10Q53GL7 1025 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 SYT10Q6XYQ8 523 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 NUP133Q8WUM0 1156 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 FEZ1Q99689 392 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 CGNQ9P2M7 1197 aaKnown RBP12.55□□□□□ -0.4
BEST1-201ENST00000378043 SERTAD1Q9UHV2 236 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 LOC102724428A0A0B4J2F2 783 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 RCAN1P53805 252 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 SIK1P57059 783 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.4
BEST1-201ENST00000378043 POSTNQ15063 836 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 HSP90AA4PQ58FG1 418 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 ACSBG1Q96GR2 724 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 ERO1AQ96HE7 468 aa12.55□□□□□ -0.4
BEST1-201ENST00000378043 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 ERICH2A1L162 156 aa12.54□□□□□ -0.4
BEST1-201ENST00000378043 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms