RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PPIP5K2O43314 1243 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 PRKAB2O43741 272 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 GYG1P46976 350 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 SF3A1Q15459 793 aaKnown RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 MICU3Q86XE3 530 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 LCORLQ8N3X6 602 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 LARGE2Q8N3Y3 721 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 KCNQ5Q9NR82 932 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
HMGCL-202ENST00000374487 RAI14Q9P0K7 980 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 ANKIB1Q9P2G1 1089 aa14.06□□□□□ -0.16
HMGCL-202ENST00000374487 RXRAP19793 462 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 CYP7A1P22680 504 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 UBE4AQ14139 1066 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 SYNE3Q6ZMZ3 975 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 TBC1D16Q8TBP0 767 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 IGDCC4Q8TDY8 1250 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 ARAP2Q8WZ64 1704 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 CCDC69A6NI79 296 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 ZNF500O60304 480 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 KINO60870 393 aaKnown RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 KLRK1P26718 216 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 RRP12Q5JTH9 1297 aaKnown RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 RTFDC1Q9BY42 306 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-202ENST00000374487 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
HMGCL-202ENST00000374487 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
HMGCL-202ENST00000374487 CTAGE5O15320 804 aa14.04□□□□□ -0.16
HMGCL-202ENST00000374487 SART3Q15020 963 aaKnown RBP14.04□□□□□ -0.16
HMGCL-202ENST00000374487 STK38Q15208 465 aa14.04□□□□□ -0.16
HMGCL-202ENST00000374487 ALG1Q9BT22 464 aa14.04□□□□□ -0.16
HMGCL-202ENST00000374487 LY9Q9HBG7 655 aa14.04□□□□□ -0.16
HMGCL-202ENST00000374487 GJB4Q9NTQ9 266 aa14.04□□□□□ -0.16
HMGCL-202ENST00000374487 MYO5AQ9Y4I1 1855 aaKnown RBP14.04□□□□□ -0.16
HMGCL-202ENST00000374487 LRRC37AA6NMS7 1700 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 UFL1O94874 794 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 LIFRP42702 1097 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 FAM160A1Q05DH4 1040 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 GNL2Q13823 731 aaKnown RBP14.03□□□□□ -0.16
HMGCL-202ENST00000374487 LUZP1Q86V48 1076 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 TXNRD3Q86VQ6 643 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 SGMS1Q86VZ5 419 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 DBNDD1Q9H9R9 158 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 SENP2Q9HC62 589 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 MAGEB6P1A0A0J9YX57 407 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 ERICH2A1L162 156 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 POTECB2RU33 542 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 TRIM29Q14134 588 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 STK11IPQ8N1F8 1099 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 KCNG4Q8TDN1 519 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 PHKBQ93100 1093 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
HMGCL-202ENST00000374487 PCDHA7Q9UN72 937 aa14.03□□□□□ -0.16
HMGCL-202ENST00000374487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
HMGCL-202ENST00000374487 ZNF804BA4D1E1 1349 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 GLTPD2A6NH11 291 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 YDJCA8MPS7 323 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 CDC27P30260 824 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 ZNF165P49910 485 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 MYSM1Q5VVJ2 828 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 ADALQ6DHV7 355 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 LINC00301Q8NCQ3 95 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 STAG1Q8WVM7 1258 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 MYL10Q9BUA6 226 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 CBX8Q9HC52 389 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 CLIC4Q9Y696 253 aa14.02□□□□□ -0.16
HMGCL-202ENST00000374487 LTBP1Q14766 1721 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 FZD9O00144 591 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 KIF3CO14782 793 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 OFD1O75665 1012 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 RAD17O75943 681 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 CAVIN2O95810 425 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 KIF23Q02241 960 aaPredicted RBP14.02□□□□□ -0.17
HMGCL-202ENST00000374487 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 SNW1Q13573 536 aaKnown RBP14.02□□□□□ -0.17
HMGCL-202ENST00000374487 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.17
HMGCL-202ENST00000374487 RGS22Q8NE09 1264 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.17
HMGCL-202ENST00000374487 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 GJA3Q9Y6H8 435 aa14.02□□□□□ -0.17
HMGCL-202ENST00000374487 MINDY4BA8MYZ0 360 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 SPTLC2O15270 562 aa14.01□□□□□ -0.17
HMGCL-202ENST00000374487 YEATS4O95619 227 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms