RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MAP4K4O95819 1239 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-202ENST00000374426 GNAI2P04899 355 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 INHAP05111 366 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 LDHCP07864 332 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 MCAMP43121 646 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 SPP2Q13103 211 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 RRP1BQ14684 758 aaKnown RBP17.01■□□□□ 0.31
CXCL12-202ENST00000374426 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-202ENST00000374426 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 HTATIP2Q9BUP3 242 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
CXCL12-202ENST00000374426 FARP2O94887 1054 aaPredicted RBP17■□□□□ 0.31
CXCL12-202ENST00000374426 FAM110CQ1W6H9 321 aa17■□□□□ 0.31
CXCL12-202ENST00000374426 ZNF280CQ8ND82 737 aa17■□□□□ 0.31
CXCL12-202ENST00000374426 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
CXCL12-202ENST00000374426 PNMA3Q9UL41 463 aa17■□□□□ 0.31
CXCL12-202ENST00000374426 IPO8O15397 1037 aaKnown RBP16.99■□□□□ 0.31
CXCL12-202ENST00000374426 CAP2P40123 477 aa16.99■□□□□ 0.31
CXCL12-202ENST00000374426 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
CXCL12-202ENST00000374426 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
CXCL12-202ENST00000374426 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
CXCL12-202ENST00000374426 LOC285556D6RIA3 1793 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 BCAR3O75815 825 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 HMGCS2P54868 508 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-202ENST00000374426 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-202ENST00000374426 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 COA7Q96BR5 231 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 DEFB118Q96PH6 123 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 PRO3102Q9H379 93 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 PAK6Q9NQU5 681 aaPredicted RBP16.98■□□□□ 0.31
CXCL12-202ENST00000374426 LRP2BPQ9P2M1 347 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
CXCL12-202ENST00000374426 USP17L5A8MUK1 530 aa16.97■□□□□ 0.31
CXCL12-202ENST00000374426 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
CXCL12-202ENST00000374426 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
CXCL12-202ENST00000374426 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
CXCL12-202ENST00000374426 ASCC2Q9H1I8 757 aaPredicted RBP16.97■□□□□ 0.31
CXCL12-202ENST00000374426 HERC5Q9UII4 1024 aaKnown RBP16.97■□□□□ 0.31
CXCL12-202ENST00000374426 NR2E3Q9Y5X4 410 aa16.97■□□□□ 0.31
CXCL12-202ENST00000374426 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-202ENST00000374426 TFRCP02786 760 aaKnown RBP16.96■□□□□ 0.31
CXCL12-202ENST00000374426 GCLCP48506 637 aaPredicted RBP16.96■□□□□ 0.31
CXCL12-202ENST00000374426 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
CXCL12-202ENST00000374426 CRISPLD2Q9H0B8 497 aa16.96■□□□□ 0.31
CXCL12-202ENST00000374426 SNRKQ9NRH2 765 aa16.96■□□□□ 0.31
CXCL12-202ENST00000374426 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
CXCL12-202ENST00000374426 PI4KBQ9UBF8 816 aa16.96■□□□□ 0.31
CXCL12-202ENST00000374426 ATAD5Q96QE3 1844 aa16.96■□□□□ 0.3
CXCL12-202ENST00000374426 JAG1P78504 1218 aa16.95■□□□□ 0.3
CXCL12-202ENST00000374426 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.3
CXCL12-202ENST00000374426 POLA2Q14181 598 aa16.95■□□□□ 0.3
CXCL12-202ENST00000374426 NAA16Q6N069 864 aaPredicted RBP16.95■□□□□ 0.3
CXCL12-202ENST00000374426 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
CXCL12-202ENST00000374426 DHX36Q9H2U1 1008 aaKnown RBP16.95■□□□□ 0.3
CXCL12-202ENST00000374426 GJD2Q9UKL4 321 aa16.95■□□□□ 0.3
CXCL12-202ENST00000374426 SIPA1L1O43166 1804 aa16.95■□□□□ 0.3
CXCL12-202ENST00000374426 BAG3O95817 575 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 CAPN2P17655 700 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 PPP4CP60510 307 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 NOL10Q9BSC4 688 aaKnown RBP16.94■□□□□ 0.3
CXCL12-202ENST00000374426 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 DNAJC18Q9H819 358 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 GPR108Q9NPR9 543 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
CXCL12-202ENST00000374426 EVI5O60447 810 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 HMGCRP04035 888 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
CXCL12-202ENST00000374426 BACE1P56817 501 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 MTMR2Q13614 643 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 SHROOM1Q2M3G4 852 aaPredicted RBP16.93■□□□□ 0.3
CXCL12-202ENST00000374426 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
CXCL12-202ENST00000374426 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 PAWRQ96IZ0 340 aaKnown RBP16.93■□□□□ 0.3
CXCL12-202ENST00000374426 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.93■□□□□ 0.3
CXCL12-202ENST00000374426 AS3MTQ9HBK9 375 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 MORF4L1Q9UBU8 362 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 FLT1P17948 1338 aa16.93■□□□□ 0.3
CXCL12-202ENST00000374426 ASNSP08243 561 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 PLCG2P16885 1265 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 CCDC158Q5M9N0 1113 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 DIS3LQ8TF46 1054 aaKnown RBP16.92■□□□□ 0.3
CXCL12-202ENST00000374426 PALD1Q9ULE6 856 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 COL6A3P12111 3177 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 A0A0C4DFX4 3053 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 MAST2Q6P0Q8 1798 aa16.92■□□□□ 0.3
CXCL12-202ENST00000374426 HOXA7P31268 230 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-202ENST00000374426 IRX3P78415 501 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-202ENST00000374426 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
CXCL12-202ENST00000374426 TRIM32Q13049 653 aa16.91■□□□□ 0.3
CXCL12-202ENST00000374426 FOXP4Q8IVH2 680 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-202ENST00000374426 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms