RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 A0A1W2PQ27 194 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 A0A1W2PQ64 194 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 A0A1W2PQD8 194 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 CTAGE5O15320 804 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 ZNF202O95125 648 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 IFNAR1P17181 557 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 NR5A1Q13285 461 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 TRAPPC3LQ5T215 181 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 CTR9Q6PD62 1173 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 ENAHQ8N8S7 591 aaPredicted RBP18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 ESR2Q92731 530 aa18.51■□□□□ 0.55
CNKSR1-202ENST00000374253 MYH13Q9UKX3 1938 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 GOLGA6L19H0YKK7 550 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 SLC39A14Q15043 492 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 FAM47AQ5JRC9 791 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 DNTTIP2Q5QJE6 756 aaKnown RBP18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 TIAM2Q8IVF5 1701 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 ZNF75DP51815 510 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 CCDC186Q7Z3E2 898 aa18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 DIS3L2Q8IYB7 885 aaKnown RBP18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
CNKSR1-202ENST00000374253 BECN2A8MW95 431 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 LRMPQ12912 555 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 NBPF11Q86T75 865 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 TRIM22Q8IYM9 498 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 AOPEPQ8N6M6 819 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 OXER1Q8TDS5 423 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 PTPAQ15257 358 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 SEC23AQ15436 765 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 DPCR1Q3MIW9 517 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 CRACR2BQ8N4Y2 399 aaPredicted RBP18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 PIBF1Q8WXW3 757 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 MAP3K14Q99558 947 aa18.49■□□□□ 0.55
CNKSR1-202ENST00000374253 U2AF2P26368 475 aaKnown RBP eCLIP18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 SHC4Q6S5L8 630 aa18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 DHX40Q8IX18 779 aaKnown RBP18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 ZSCAN10Q96SZ4 725 aaPredicted RBP18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 NOLC1Q14978 699 aaKnown RBP eCLIP18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 GRIK5Q16478 980 aa18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 ANKRD2Q9GZV1 360 aa18.48■□□□□ 0.55
CNKSR1-202ENST00000374253 MMP1P03956 469 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 GRIN1Q05586 938 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 IFIT1BQ5T764 474 aaKnown RBP18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 PLA2G4DQ86XP0 818 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 NOSTRINQ8IVI9 506 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 CNBD1Q8NA66 436 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 SHISA4Q96DD7 197 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 DCP1AQ9NPI6 582 aaPredicted RBP18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 ANO10Q9NW15 660 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 KIAA1468Q9P260 1216 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 AFF2P51816 1311 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 FAM205CA6NFA0 338 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 CMA1P23946 247 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 TOB1P50616 345 aaPredicted RBP18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 VPS54Q9P1Q0 977 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 ANAPC4Q9UJX5 808 aa18.47■□□□□ 0.55
CNKSR1-202ENST00000374253 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 DZIP1Q86YF9 867 aaKnown RBP18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 CLIP2Q9UDT6 1046 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 STK36Q9NRP7 1315 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 ZNF831Q5JPB2 1677 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 USP17L8P0C7I0 530 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 SYKP43405 635 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
CNKSR1-202ENST00000374253 GOLGA6L6A8MZA4 724 aa18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 SAFBQ15424 915 aaKnown RBP eCLIP18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 ZRSR1Q15695 479 aaKnown RBP18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 CEP57L1Q8IYX8 460 aa18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 TMTC2Q8N394 836 aa18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 DEXIO95424 95 aa18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 ARID5BQ14865 1188 aa18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 PCDHB6Q9Y5E3 794 aa18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 V9GY48 417 aaPredicted RBP18.45■□□□□ 0.54
CNKSR1-202ENST00000374253 PNOCQ13519 176 aa18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 WASF1Q92558 559 aa18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 CRNKL1Q9BZJ0 848 aaKnown RBP18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 MCM9Q9NXL9 1143 aa18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 IQCA1Q86XH1 822 aa18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
CNKSR1-202ENST00000374253 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 DUOX1Q9NRD9 1551 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 SEMA3EO15041 775 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 PRR5LQ6MZQ0 368 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 CATIPQ7Z7H3 387 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 MTMR7Q9Y216 660 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 FOXN1O15353 648 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 AKAP17AQ02040 695 aaKnown RBP18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 GRAPQ13588 217 aa18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 NOM1Q5C9Z4 860 aaKnown RBP18.43■□□□□ 0.54
CNKSR1-202ENST00000374253 EARS2Q5JPH6 523 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms