RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ESR2Q92731 530 aa21.68■■□□□ 1.06
USP49-202ENST00000373010 ARHGEF1Q92888 912 aaKnown RBP21.68■■□□□ 1.06
USP49-202ENST00000373010 RTCBQ9Y3I0 505 aaKnown RBP21.68■■□□□ 1.06
USP49-202ENST00000373010 BTBD18B2RXH4 712 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 SEC23AQ15436 765 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.67■■□□□ 1.06
USP49-202ENST00000373010 TRIM22Q8IYM9 498 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 TMTC2Q8N394 836 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 FNBP4Q8N3X1 1017 aaPredicted RBP21.67■■□□□ 1.06
USP49-202ENST00000373010 AOPEPQ8N6M6 819 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 WASF1Q92558 559 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 MTA3Q9BTC8 594 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 SPTLC3Q9NUV7 552 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 USP21Q9UK80 565 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 PRDM1O75626 825 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 CHAF1AQ13111 956 aaPredicted RBP21.67■■□□□ 1.06
USP49-202ENST00000373010 TPTE2Q6XPS3 522 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 CRACR2BQ8N4Y2 399 aaPredicted RBP21.67■■□□□ 1.06
USP49-202ENST00000373010 NSUN4Q96CB9 384 aaKnown RBP21.67■■□□□ 1.06
USP49-202ENST00000373010 CLIP2Q9UDT6 1046 aa21.67■■□□□ 1.06
USP49-202ENST00000373010 HIBADHP31937 336 aaKnown RBP21.66■■□□□ 1.06
USP49-202ENST00000373010 MECOMQ03112 1051 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 EVX2Q03828 476 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 LRMPQ12912 555 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 DPCR1Q3MIW9 517 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 SHC4Q6S5L8 630 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 CLIC6Q96NY7 704 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 BRIP1Q9BX63 1249 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 JAG2Q9Y219 1238 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 BIN1O00499 593 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 PPP6R2O75170 966 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 MMP1P03956 469 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 SLC3A2P08195 630 aaKnown RBP21.66■■□□□ 1.06
USP49-202ENST00000373010 SARM1Q6SZW1 724 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 SLC51AQ86UW1 340 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 TXNRD3Q86VQ6 643 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 DUOX1Q9NRD9 1551 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
USP49-202ENST00000373010 TM4SF1P30408 202 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 NOSTRINQ8IVI9 506 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 DIS3L2Q8IYB7 885 aaKnown RBP21.65■■□□□ 1.06
USP49-202ENST00000373010 SEMA3EO15041 775 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 CCDC144BQ3MJ40 725 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 CTR9Q6PD62 1173 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 ENAHQ8N8S7 591 aaPredicted RBP21.65■■□□□ 1.06
USP49-202ENST00000373010 JMYQ8N9B5 988 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 ANKRD2Q9GZV1 360 aa21.65■■□□□ 1.06
USP49-202ENST00000373010 UQCRHLA0A096LP55 91 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 CCDC196A0A1B0GTZ2 297 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 DEXIO95424 95 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 UQCRHP07919 91 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 PRDX5P30044 214 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 SYKP43405 635 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 AATFQ9NY61 560 aaKnown RBP eCLIP21.64■■□□□ 1.05
USP49-202ENST00000373010 MYH6P13533 1939 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 USP17L12C9JPN9 530 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 USP17L21D6R901 530 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 SAFBQ15424 915 aaKnown RBP eCLIP21.64■■□□□ 1.05
USP49-202ENST00000373010 ZSCAN10Q96SZ4 725 aaPredicted RBP21.64■■□□□ 1.05
USP49-202ENST00000373010 NAT10Q9H0A0 1025 aaKnown RBP21.64■■□□□ 1.05
USP49-202ENST00000373010 HPSEQ9Y251 543 aa21.64■■□□□ 1.05
USP49-202ENST00000373010 CDC25BP30305 580 aa21.63■■□□□ 1.05
USP49-202ENST00000373010 TOB1P50616 345 aaPredicted RBP21.63■■□□□ 1.05
USP49-202ENST00000373010 ZRSR1Q15695 479 aaKnown RBP21.63■■□□□ 1.05
USP49-202ENST00000373010 TAF1LQ8IZX4 1826 aa21.63■■□□□ 1.05
USP49-202ENST00000373010 TNRC6CQ9HCJ0 1690 aaKnown RBP21.63■■□□□ 1.05
USP49-202ENST00000373010 THSD7AQ9UPZ6 1657 aa21.63■■□□□ 1.05
USP49-202ENST00000373010 NPHP1O15259 732 aa21.63■■□□□ 1.05
USP49-202ENST00000373010 RCAN1P53805 252 aa21.63■■□□□ 1.05
USP49-202ENST00000373010 NR5A1Q13285 461 aa21.62■■□□□ 1.05
USP49-202ENST00000373010 RESP18Q5W5W9 173 aa21.62■■□□□ 1.05
USP49-202ENST00000373010 ISM2Q6H9L7 571 aa21.61■■□□□ 1.05
USP49-202ENST00000373010 OXER1Q8TDS5 423 aa21.61■■□□□ 1.05
USP49-202ENST00000373010 MRFAP1L1Q96HT8 127 aa21.61■■□□□ 1.05
USP49-202ENST00000373010 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.61■■□□□ 1.05
USP49-202ENST00000373010 NLRP12P59046 1061 aa21.61■■□□□ 1.05
USP49-202ENST00000373010 CUTAO60888 179 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 IFIT1BQ5T764 474 aaKnown RBP21.6■■□□□ 1.05
USP49-202ENST00000373010 CACTINQ8WUQ7 758 aaKnown RBP21.6■■□□□ 1.05
USP49-202ENST00000373010 SHISA4Q96DD7 197 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 TIGD1Q96MW7 591 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 PDS5AQ29RF7 1337 aaKnown RBP21.6■■□□□ 1.05
USP49-202ENST00000373010 hCG_1642624A0A1W2PR95 340 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 CYP2D6P10635 497 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 RFC4P35249 363 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 SPECC1Q5M775 1068 aa21.6■■□□□ 1.05
USP49-202ENST00000373010 FOXP1Q9H334 677 aaPredicted RBP21.6■■□□□ 1.05
USP49-202ENST00000373010 DCP1AQ9NPI6 582 aaPredicted RBP21.6■■□□□ 1.05
USP49-202ENST00000373010 FGRP09769 529 aa21.59■■□□□ 1.05
USP49-202ENST00000373010 CRNKL1Q9BZJ0 848 aaKnown RBP21.59■■□□□ 1.05
USP49-202ENST00000373010 FAM237AA0A1B0GTK4 181 aa21.59■■□□□ 1.05
USP49-202ENST00000373010 PLEKHA8P1O95397 391 aa21.59■■□□□ 1.05
USP49-202ENST00000373010 RBM6P78332 1123 aaKnown RBP21.59■■□□□ 1.05
USP49-202ENST00000373010 KRI1Q8N9T8 703 aaKnown RBP21.59■■□□□ 1.05
USP49-202ENST00000373010 LY75O60449 1722 aa21.59■■□□□ 1.05
USP49-202ENST00000373010 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.05
USP49-202ENST00000373010 IRS2Q9Y4H2 1338 aa21.58■■□□□ 1.05
USP49-202ENST00000373010 NMT2O60551 498 aa21.58■■□□□ 1.05
USP49-202ENST00000373010 ATP2B1P20020 1258 aa21.58■■□□□ 1.05
USP49-202ENST00000373010 GRIN1Q05586 938 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms