RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 CYP2E1P05181 493 aaPredicted RBP19.72■□□□□ 0.75
VMA21-202ENST00000370361 PABPC4Q13310 644 aaKnown RBP eCLIP19.72■□□□□ 0.756e-8■■■□□ 15.2
VMA21-202ENST00000370361 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
VMA21-202ENST00000370361 DBNLQ9UJU6 430 aaKnown RBP19.72■□□□□ 0.75
VMA21-202ENST00000370361 CENPFP49454 3210 aa19.72■□□□□ 0.75
VMA21-202ENST00000370361 HMMRO75330 724 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 FMNL1O95466 1100 aaPredicted RBP19.71■□□□□ 0.75
VMA21-202ENST00000370361 CAPN2P17655 700 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 CAP2P40123 477 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 SLC4A8Q2Y0W8 1093 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 FOXP4Q8IVH2 680 aaPredicted RBP19.71■□□□□ 0.75
VMA21-202ENST00000370361 ZNF280CQ8ND82 737 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 SMCR8Q8TEV9 937 aaPredicted RBP19.71■□□□□ 0.75
VMA21-202ENST00000370361 ARHGAP39Q9C0H5 1083 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 AATFQ9NY61 560 aaKnown RBP eCLIP19.71■□□□□ 0.75
VMA21-202ENST00000370361 DDX19BQ9UMR2 479 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 FOCADQ5VW36 1801 aa19.71■□□□□ 0.75
VMA21-202ENST00000370361 TRIM75PA6NK02 468 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 USP17L5A8MUK1 530 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 ASNSP08243 561 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 METTL16Q86W50 562 aaKnown RBP19.7■□□□□ 0.74
VMA21-202ENST00000370361 RPAP2Q8IXW5 612 aaPredicted RBP19.7■□□□□ 0.74
VMA21-202ENST00000370361 NKX2-3Q8TAU0 364 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 RAET1EQ8TD07 263 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 SH3RF3Q8TEJ3 882 aaPredicted RBP19.7■□□□□ 0.74
VMA21-202ENST00000370361 TRIM47Q96LD4 638 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 TRIM34Q9BYJ4 488 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 SNRKQ9NRH2 765 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 MYPNQ86TC9 1320 aa19.7■□□□□ 0.74
VMA21-202ENST00000370361 HLA-DOAP06340 250 aa19.69■□□□□ 0.74
VMA21-202ENST00000370361 OSBPP22059 807 aa19.69■□□□□ 0.74
VMA21-202ENST00000370361 ZAP70P43403 619 aa19.69■□□□□ 0.74
VMA21-202ENST00000370361 MAP3K12Q12852 859 aa19.69■□□□□ 0.74
VMA21-202ENST00000370361 EAF2Q96CJ1 260 aaPredicted RBP19.69■□□□□ 0.74
VMA21-202ENST00000370361 FLT1P17948 1338 aa19.69■□□□□ 0.74
VMA21-202ENST00000370361 ATAD5Q96QE3 1844 aa19.69■□□□□ 0.74
VMA21-202ENST00000370361 LOC285556D6RIA3 1793 aa19.68■□□□□ 0.74
VMA21-202ENST00000370361 CYP2C8P10632 490 aa19.68■□□□□ 0.74
VMA21-202ENST00000370361 GRK4P32298 578 aa19.68■□□□□ 0.74
VMA21-202ENST00000370361 GCLCP48506 637 aaPredicted RBP19.68■□□□□ 0.74
VMA21-202ENST00000370361 TTF1Q15361 905 aaPredicted RBP19.68■□□□□ 0.74
VMA21-202ENST00000370361 SLAIN1Q8ND83 568 aa19.68■□□□□ 0.74
VMA21-202ENST00000370361 TGFBRAP1Q8WUH2 860 aa19.68■□□□□ 0.74
VMA21-202ENST00000370361 MGAMO43451 1857 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 UBXN2AP68543 259 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 FAM110CQ1W6H9 321 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 SH3D19Q5HYK7 790 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 CRACR2BQ8N4Y2 399 aaPredicted RBP19.67■□□□□ 0.74
VMA21-202ENST00000370361 PANK1Q8TE04 598 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 KIF1BPQ96EK5 621 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 WDR18Q9BV38 432 aa19.67■□□□□ 0.74
VMA21-202ENST00000370361 CCDC8Q9H0W5 538 aaPredicted RBP19.67■□□□□ 0.74
VMA21-202ENST00000370361 IDH1O75874 414 aaKnown RBP19.66■□□□□ 0.74
VMA21-202ENST00000370361 EN2P19622 333 aaPredicted RBP19.66■□□□□ 0.74
VMA21-202ENST00000370361 CYP7A1P22680 504 aa19.66■□□□□ 0.74
VMA21-202ENST00000370361 SPP2Q13103 211 aa19.66■□□□□ 0.74
VMA21-202ENST00000370361 AACSQ86V21 672 aa19.66■□□□□ 0.74
VMA21-202ENST00000370361 CLASRPQ8N2M8 674 aaKnown RBP19.66■□□□□ 0.74
VMA21-202ENST00000370361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.66■□□□□ 0.74
VMA21-202ENST00000370361 PIH1D3Q9NQM4 214 aaKnown RBP19.66■□□□□ 0.74
VMA21-202ENST00000370361 ZSWIM8A7E2V4 1837 aa19.66■□□□□ 0.74
VMA21-202ENST00000370361 CDK5RAP2Q96SN8 1893 aa19.66■□□□□ 0.74
VMA21-202ENST00000370361 C19orf81C9J6K1 198 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 RAB11FIP3O75154 756 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 CTGFP29279 349 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 IRF5Q13568 498 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 RHPN1Q8TCX5 695 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 SH3TC2Q8TF17 1288 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 TLR7Q9NYK1 1049 aaKnown RBP19.65■□□□□ 0.74
VMA21-202ENST00000370361 EXOC6BQ9Y2D4 811 aa19.65■□□□□ 0.74
VMA21-202ENST00000370361 FAM196BA6NMK8 535 aa19.64■□□□□ 0.73
VMA21-202ENST00000370361 ADGRA1Q86SQ6 560 aa19.64■□□□□ 0.73
VMA21-202ENST00000370361 MAPKAPK5Q8IW41 473 aa19.64■□□□□ 0.73
VMA21-202ENST00000370361 PXYLP1Q8TE99 480 aa19.64■□□□□ 0.73
VMA21-202ENST00000370361 COA7Q96BR5 231 aa19.64■□□□□ 0.73
VMA21-202ENST00000370361 TAOK2Q9UL54 1235 aa19.64■□□□□ 0.73
VMA21-202ENST00000370361 SIPA1L1O43166 1804 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 TNPO2O14787 897 aaKnown RBP19.63■□□□□ 0.73
VMA21-202ENST00000370361 BACE1P56817 501 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 PRKCZQ05513 592 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 MAGEB6Q8N7X4 407 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 GTF3C2Q8WUA4 911 aaPredicted RBP19.63■□□□□ 0.73
VMA21-202ENST00000370361 EHD4Q9H223 541 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 ZBTB40Q9NUA8 1239 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 TMOD4Q9NZQ9 345 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 BRCA2P51587 3418 aa19.63■□□□□ 0.73
VMA21-202ENST00000370361 MYO5AQ9Y4I1 1855 aaKnown RBP19.62■□□□□ 0.73
VMA21-202ENST00000370361 SLURP2P0DP57 97 aa19.62■□□□□ 0.73
VMA21-202ENST00000370361 USP5P45974 858 aa19.62■□□□□ 0.73
VMA21-202ENST00000370361 HMGCS2P54868 508 aa19.62■□□□□ 0.73
VMA21-202ENST00000370361 TREML2Q5T2D2 321 aa19.62■□□□□ 0.73
VMA21-202ENST00000370361 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
VMA21-202ENST00000370361 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
VMA21-202ENST00000370361 MKI67P46013 3256 aaKnown RBP19.61■□□□□ 0.73
VMA21-202ENST00000370361 GJB1P08034 283 aa19.61■□□□□ 0.73
VMA21-202ENST00000370361 IFIT2P09913 472 aaKnown RBP19.61■□□□□ 0.73
VMA21-202ENST00000370361 HOXA7P31268 230 aaPredicted RBP19.61■□□□□ 0.73
VMA21-202ENST00000370361 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
VMA21-202ENST00000370361 BIN2Q9UBW5 565 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms