RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 PARP1P09874 1014 aaKnown RBP17.53■□□□□ 0.4
PRDM1-203ENST00000369096 TRIM14Q14142 442 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 KSR2Q6VAB6 950 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 CROCCP2Q86T23 111 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 PSMB7Q99436 277 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 VCX3AQ9NNX9 186 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 ZRANB1Q9UGI0 708 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 TTLL3Q9Y4R7 772 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 CYP26C1Q6V0L0 522 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 NAP1L4Q99733 375 aaKnown RBP17.53■□□□□ 0.4
PRDM1-203ENST00000369096 ARHGAP25P42331 645 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 SH2D4BQ5SQS7 431 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
PRDM1-203ENST00000369096 BAIAP2L1Q9UHR4 511 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 SECISBP2LQ93073 1101 aaKnown RBP17.53■□□□□ 0.4
PRDM1-203ENST00000369096 JAG2Q9Y219 1238 aa17.53■□□□□ 0.4
PRDM1-203ENST00000369096 STMN1P16949 149 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 RILPQ96NA2 401 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 CACYBPQ9HB71 228 aaKnown RBP17.52■□□□□ 0.4
PRDM1-203ENST00000369096 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 IL16Q14005 1332 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 NACA2Q9H009 215 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 MAGEA1P43355 309 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 CNNM4Q6P4Q7 775 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 GPIHBP1Q8IV16 184 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 ADCY10Q96PN6 1610 aa17.52■□□□□ 0.4
PRDM1-203ENST00000369096 RBBP5Q15291 538 aaKnown RBP17.52■□□□□ 0.39
PRDM1-203ENST00000369096 PRR16Q569H4 304 aa17.52■□□□□ 0.39
PRDM1-203ENST00000369096 SRGAP1Q7Z6B7 1085 aa17.52■□□□□ 0.39
PRDM1-203ENST00000369096 JDP2Q8WYK2 163 aa17.52■□□□□ 0.39
PRDM1-203ENST00000369096 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.39
PRDM1-203ENST00000369096 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.39
PRDM1-203ENST00000369096 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
PRDM1-203ENST00000369096 CD19P15391 556 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 SLC12A2P55011 1212 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 RSPH3Q86UC2 560 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 CCDC105Q8IYK2 499 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 RAB3GAP1Q15042 981 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 LONRF3Q496Y0 759 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 RNF10Q8N5U6 811 aaKnown RBP17.51■□□□□ 0.39
PRDM1-203ENST00000369096 RIOK3O14730 519 aaKnown RBP17.51■□□□□ 0.39
PRDM1-203ENST00000369096 SMIM24O75264 130 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 TUBB2AQ13885 445 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 TACO1Q9BSH4 297 aaKnown RBP17.51■□□□□ 0.39
PRDM1-203ENST00000369096 TUBB2BQ9BVA1 445 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 RBM28Q9NW13 759 aaKnown RBP17.51■□□□□ 0.39
PRDM1-203ENST00000369096 ANKFY1Q9P2R3 1169 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 USH1CQ9Y6N9 552 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 ARHGEF12Q9NZN5 1544 aa17.51■□□□□ 0.39
PRDM1-203ENST00000369096 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 RIMBP2O15034 1052 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 KRT71Q3SY84 523 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 GPCPD1Q9NPB8 672 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 SYCP2Q9BX26 1530 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 STRN3Q13033 797 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 PAK2Q13177 524 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 RPS6KA2Q15349 733 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 BSPRYQ5W0U4 402 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 SND1Q7KZF4 910 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRDM1-203ENST00000369096 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 FAM71BQ8TC56 605 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 SETSIPP0DME0 302 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 NSMCE1Q8WV22 266 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 KCNH3Q9ULD8 1083 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 ELF2Q15723 593 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 TPTE2Q6XPS3 522 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 MICAL1Q8TDZ2 1067 aa17.5■□□□□ 0.39
PRDM1-203ENST00000369096 ZCRB1Q8TBF4 217 aaKnown RBP17.49■□□□□ 0.39
PRDM1-203ENST00000369096 ARHGEF35A5YM69 484 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 ATL3Q6DD88 541 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 CTAGE3PQ8IX95 158 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 UHRF1BP1Q6BDS2 1440 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 TXKP42681 527 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 INTS4Q96HW7 963 aaKnown RBP17.49■□□□□ 0.39
PRDM1-203ENST00000369096 VPS37BQ9H9H4 285 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
PRDM1-203ENST00000369096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.49■□□□□ 0.39
PRDM1-203ENST00000369096 CALUO43852 315 aaPredicted RBP17.48■□□□□ 0.39
PRDM1-203ENST00000369096 FANCCQ00597 558 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 PPFIA1Q13136 1202 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 PIK3AP1Q6ZUJ8 805 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 EXOC7Q9UPT5 735 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 RNF40O75150 1001 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 MGARPQ8TDB4 240 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 ANKRD42Q8N9B4 389 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 BCAP29Q9UHQ4 241 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 STK38LQ9Y2H1 464 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 ATP2A3Q93084 1043 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 GBP5Q96PP8 586 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
PRDM1-203ENST00000369096 PPFIA2O75334 1257 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 MBD4O95243 580 aa17.47■□□□□ 0.39
PRDM1-203ENST00000369096 FBLN1P23142 703 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms