RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SH3RF3Q8TEJ3 882 aaPredicted RBP19.68■□□□□ 0.74
CKS1B-202ENST00000368436 DBNDD2Q9BQY9 259 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 SNRKQ9NRH2 765 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
CKS1B-202ENST00000368436 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
CKS1B-202ENST00000368436 ZBTB7BO15156 539 aaPredicted RBP19.67■□□□□ 0.74
CKS1B-202ENST00000368436 IGSF3O75054 1194 aa19.67■□□□□ 0.74
CKS1B-202ENST00000368436 SURF6O75683 361 aaKnown RBP19.67■□□□□ 0.74
CKS1B-202ENST00000368436 PPP4CP60510 307 aa19.67■□□□□ 0.74
CKS1B-202ENST00000368436 PRKCZQ05513 592 aa19.67■□□□□ 0.74
CKS1B-202ENST00000368436 TBC1D2Q9BYX2 928 aa19.67■□□□□ 0.74
CKS1B-202ENST00000368436 GABRQQ9UN88 632 aa19.67■□□□□ 0.74
CKS1B-202ENST00000368436 BAG3O95817 575 aa19.66■□□□□ 0.74
CKS1B-202ENST00000368436 CYP2E1P05181 493 aaPredicted RBP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 CAP2P40123 477 aa19.66■□□□□ 0.74
CKS1B-202ENST00000368436 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 OS9Q13438 667 aaPredicted RBP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 RRP1BQ14684 758 aaKnown RBP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 NAA16Q6N069 864 aaPredicted RBP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 PROCA1Q8NCQ7 364 aaPredicted RBP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
CKS1B-202ENST00000368436 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
CKS1B-202ENST00000368436 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
CKS1B-202ENST00000368436 RLBP1P12271 317 aa19.65■□□□□ 0.74
CKS1B-202ENST00000368436 SPP2Q13103 211 aa19.65■□□□□ 0.74
CKS1B-202ENST00000368436 HABP4Q5JVS0 413 aaKnown RBP19.65■□□□□ 0.74
CKS1B-202ENST00000368436 TREML2Q5T2D2 321 aa19.65■□□□□ 0.74
CKS1B-202ENST00000368436 FTSJ3Q8IY81 847 aaKnown RBP19.65■□□□□ 0.74
CKS1B-202ENST00000368436 ZNF280CQ8ND82 737 aa19.65■□□□□ 0.74
CKS1B-202ENST00000368436 SLAIN1Q8ND83 568 aa19.65■□□□□ 0.74
CKS1B-202ENST00000368436 SMCR8Q8TEV9 937 aaPredicted RBP19.65■□□□□ 0.74
CKS1B-202ENST00000368436 NOL10Q9BSC4 688 aaKnown RBP19.65■□□□□ 0.74
CKS1B-202ENST00000368436 DHX36Q9H2U1 1008 aaKnown RBP19.65■□□□□ 0.74
CKS1B-202ENST00000368436 AATFQ9NY61 560 aaKnown RBP eCLIP19.65■□□□□ 0.74
CKS1B-202ENST00000368436 PI4KBQ9UBF8 816 aa19.65■□□□□ 0.74
CKS1B-202ENST00000368436 DOCK3Q8IZD9 2030 aa19.64■□□□□ 0.74
CKS1B-202ENST00000368436 GJB1P08034 283 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 CCL5P13501 91 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 PLCG2P16885 1265 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 ADGRA1Q86SQ6 560 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 MIER1Q8N108 512 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 NKX2-3Q8TAU0 364 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 PNMA3Q9UL41 463 aa19.64■□□□□ 0.73
CKS1B-202ENST00000368436 USP17L5A8MUK1 530 aa19.63■□□□□ 0.73
CKS1B-202ENST00000368436 GJA8P48165 433 aa19.63■□□□□ 0.73
CKS1B-202ENST00000368436 FLT3LGP49771 235 aa19.63■□□□□ 0.73
CKS1B-202ENST00000368436 UBXN2AP68543 259 aa19.63■□□□□ 0.73
CKS1B-202ENST00000368436 METTL16Q86W50 562 aaKnown RBP19.63■□□□□ 0.73
CKS1B-202ENST00000368436 ITPRIPQ8IWB1 547 aa19.63■□□□□ 0.73
CKS1B-202ENST00000368436 DBNLQ9UJU6 430 aaKnown RBP19.63■□□□□ 0.73
CKS1B-202ENST00000368436 ADCY3O60266 1144 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 ZAP70P43403 619 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 IRF5Q13568 498 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 SH3D19Q5HYK7 790 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 FOXP4Q8IVH2 680 aaPredicted RBP19.62■□□□□ 0.73
CKS1B-202ENST00000368436 ANKRD13CQ8N6S4 541 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 PXYLP1Q8TE99 480 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 TGFBRAP1Q8WUH2 860 aa19.62■□□□□ 0.73
CKS1B-202ENST00000368436 EAF2Q96CJ1 260 aaPredicted RBP19.62■□□□□ 0.73
CKS1B-202ENST00000368436 PIH1D3Q9NQM4 214 aaKnown RBP19.62■□□□□ 0.73
CKS1B-202ENST00000368436 FLT1P17948 1338 aa19.61■□□□□ 0.73
CKS1B-202ENST00000368436 TNPO2O14787 897 aaKnown RBP19.61■□□□□ 0.73
CKS1B-202ENST00000368436 FAM110CQ1W6H9 321 aa19.61■□□□□ 0.73
CKS1B-202ENST00000368436 UBE2Q1Q7Z7E8 422 aa19.61■□□□□ 0.73
CKS1B-202ENST00000368436 WDR18Q9BV38 432 aa19.61■□□□□ 0.73
CKS1B-202ENST00000368436 RNF208Q9H0X6 261 aa19.61■□□□□ 0.73
CKS1B-202ENST00000368436 AS3MTQ9HBK9 375 aa19.61■□□□□ 0.73
CKS1B-202ENST00000368436 BIN2Q9UBW5 565 aaPredicted RBP19.61■□□□□ 0.73
CKS1B-202ENST00000368436 GCLCP48506 637 aaPredicted RBP19.6■□□□□ 0.73
CKS1B-202ENST00000368436 HMGCS2P54868 508 aa19.6■□□□□ 0.73
CKS1B-202ENST00000368436 PABPC4Q13310 644 aaKnown RBP eCLIP19.6■□□□□ 0.73
CKS1B-202ENST00000368436 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
CKS1B-202ENST00000368436 CCDC8Q9H0W5 538 aaPredicted RBP19.6■□□□□ 0.73
CKS1B-202ENST00000368436 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
CKS1B-202ENST00000368436 TLR7Q9NYK1 1049 aaKnown RBP19.6■□□□□ 0.73
CKS1B-202ENST00000368436 MYH1P12882 1939 aa19.6■□□□□ 0.73
CKS1B-202ENST00000368436 JAG1P78504 1218 aa19.59■□□□□ 0.73
CKS1B-202ENST00000368436 CEP85Q6P2H3 762 aa19.59■□□□□ 0.73
CKS1B-202ENST00000368436 COA7Q96BR5 231 aa19.59■□□□□ 0.73
CKS1B-202ENST00000368436 UNC93B1Q9H1C4 597 aa19.59■□□□□ 0.73
CKS1B-202ENST00000368436 GINM1Q9NU53 330 aa19.59■□□□□ 0.73
CKS1B-202ENST00000368436 PALD1Q9ULE6 856 aa19.59■□□□□ 0.73
CKS1B-202ENST00000368436 H0YGN5 161 aa19.58■□□□□ 0.72
CKS1B-202ENST00000368436 ASNSP08243 561 aa19.58■□□□□ 0.72
CKS1B-202ENST00000368436 ELNP15502 786 aa19.58■□□□□ 0.72
CKS1B-202ENST00000368436 BACE1P56817 501 aa19.58■□□□□ 0.72
CKS1B-202ENST00000368436 U2AF1L4Q8WU68 220 aaKnown RBP19.58■□□□□ 0.72
CKS1B-202ENST00000368436 ASCC2Q9H1I8 757 aaPredicted RBP19.58■□□□□ 0.72
CKS1B-202ENST00000368436 SGPL1O95470 568 aa19.57■□□□□ 0.72
CKS1B-202ENST00000368436 INHAP05111 366 aa19.57■□□□□ 0.72
CKS1B-202ENST00000368436 CAPN2P17655 700 aa19.57■□□□□ 0.72
CKS1B-202ENST00000368436 CYP7A1P22680 504 aa19.57■□□□□ 0.72
CKS1B-202ENST00000368436 DYNLL1P63167 89 aaKnown RBP19.57■□□□□ 0.72
CKS1B-202ENST00000368436 COLQQ9Y215 455 aaPredicted RBP19.57■□□□□ 0.72
CKS1B-202ENST00000368436 PLXNB2O15031 1838 aa19.57■□□□□ 0.72
CKS1B-202ENST00000368436 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
CKS1B-202ENST00000368436 C19orf81C9J6K1 198 aa19.56■□□□□ 0.72
CKS1B-202ENST00000368436 HOXA7P31268 230 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-202ENST00000368436 CERS3Q8IU89 383 aa19.56■□□□□ 0.72
CKS1B-202ENST00000368436 ERC1Q8IUD2 1116 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms