RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ZSCAN29Q8IWY8 852 aaPredicted RBP19.61■□□□□ 0.73
COPE-202ENST00000349893 TBC1D2Q9BYX2 928 aa19.61■□□□□ 0.73
COPE-202ENST00000349893 SPTBN5Q9NRC6 3674 aaKnown RBP19.61■□□□□ 0.73
COPE-202ENST00000349893 COL6A1P12109 1028 aa19.6■□□□□ 0.73
COPE-202ENST00000349893 SYN1P17600 705 aa19.6■□□□□ 0.73
COPE-202ENST00000349893 PHKA1P46020 1223 aa19.6■□□□□ 0.73
COPE-202ENST00000349893 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
COPE-202ENST00000349893 COL25A1Q9BXS0 654 aaPredicted RBP19.6■□□□□ 0.73
COPE-202ENST00000349893 OSBPL5Q9H0X9 879 aaPredicted RBP19.6■□□□□ 0.73
COPE-202ENST00000349893 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
COPE-202ENST00000349893 PABPC4Q13310 644 aaKnown RBP eCLIP19.59■□□□□ 0.738e-7■■■□□ 16.5
COPE-202ENST00000349893 SH3D19Q5HYK7 790 aa19.59■□□□□ 0.73
COPE-202ENST00000349893 SLF2Q8IX21 1173 aa19.59■□□□□ 0.73
COPE-202ENST00000349893 TRIB2Q92519 343 aa19.59■□□□□ 0.73
COPE-202ENST00000349893 UBE2OQ9C0C9 1292 aaKnown RBP19.59■□□□□ 0.73
COPE-202ENST00000349893 ASCC2Q9H1I8 757 aaPredicted RBP19.59■□□□□ 0.73
COPE-202ENST00000349893 ATAD5Q96QE3 1844 aa19.59■□□□□ 0.73
COPE-202ENST00000349893 XRCC5P13010 732 aaKnown RBP19.58■□□□□ 0.72
COPE-202ENST00000349893 RHBDL3P58872 404 aa19.58■□□□□ 0.72
COPE-202ENST00000349893 SPP2Q13103 211 aa19.58■□□□□ 0.72
COPE-202ENST00000349893 FAM109BQ6ICB4 259 aaPredicted RBP19.58■□□□□ 0.72
COPE-202ENST00000349893 ZNF280CQ8ND82 737 aa19.58■□□□□ 0.72
COPE-202ENST00000349893 CEP126Q9P2H0 1117 aa19.58■□□□□ 0.72
COPE-202ENST00000349893 MROH7-TTC4A0A0A0MT08 1334 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 PRUNE2Q8WUY3 3088 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 GPR75-ASB3A0A0A6YYF3 556 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 POTEB2H3BUK9 544 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 BTDP43251 543 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 RASGRF1Q13972 1273 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 CCDC102BQ68D86 513 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
COPE-202ENST00000349893 MRS2Q9HD23 443 aa19.57■□□□□ 0.72
COPE-202ENST00000349893 MAP4K4O95819 1239 aaPredicted RBP19.56■□□□□ 0.72
COPE-202ENST00000349893 HMGCS2P54868 508 aa19.56■□□□□ 0.72
COPE-202ENST00000349893 PICALMQ13492 652 aa19.56■□□□□ 0.72
COPE-202ENST00000349893 ZNF521Q96K83 1311 aa19.55■□□□□ 0.72
COPE-202ENST00000349893 PRKAR2AP13861 404 aaKnown RBP19.55■□□□□ 0.72
COPE-202ENST00000349893 IL15P40933 162 aaPredicted RBP19.55■□□□□ 0.72
COPE-202ENST00000349893 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.55■□□□□ 0.72
COPE-202ENST00000349893 ZNF384Q8TF68 577 aa19.55■□□□□ 0.72
COPE-202ENST00000349893 SOCS4Q8WXH5 440 aa19.55■□□□□ 0.72
COPE-202ENST00000349893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.55■□□□□ 0.72
COPE-202ENST00000349893 ADORA1P30542 326 aa19.54■□□□□ 0.72
COPE-202ENST00000349893 CAP2P40123 477 aa19.54■□□□□ 0.72
COPE-202ENST00000349893 SPTY2D1Q68D10 685 aaPredicted RBP19.54■□□□□ 0.72
COPE-202ENST00000349893 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
COPE-202ENST00000349893 USP6NLQ92738 828 aa19.54■□□□□ 0.72
COPE-202ENST00000349893 SIL1Q9H173 461 aa19.54■□□□□ 0.72
COPE-202ENST00000349893 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
COPE-202ENST00000349893 USP17L5A8MUK1 530 aa19.53■□□□□ 0.72
COPE-202ENST00000349893 HOXA7P31268 230 aaPredicted RBP19.53■□□□□ 0.72
COPE-202ENST00000349893 RRP1BQ14684 758 aaKnown RBP19.53■□□□□ 0.72
COPE-202ENST00000349893 LHX8Q68G74 356 aa19.53■□□□□ 0.72
COPE-202ENST00000349893 GUCD1Q96NT3 240 aa19.53■□□□□ 0.72
COPE-202ENST00000349893 WDR18Q9BV38 432 aa19.53■□□□□ 0.72
COPE-202ENST00000349893 CYP2B6P20813 491 aa19.52■□□□□ 0.72
COPE-202ENST00000349893 MECOMQ03112 1051 aa19.52■□□□□ 0.72
COPE-202ENST00000349893 LRRC26Q2I0M4 334 aa19.52■□□□□ 0.72
COPE-202ENST00000349893 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
COPE-202ENST00000349893 NUDT12Q9BQG2 462 aa19.52■□□□□ 0.72
COPE-202ENST00000349893 ABCF2Q9UG63 623 aa19.52■□□□□ 0.72
COPE-202ENST00000349893 MAST2Q6P0Q8 1798 aa19.52■□□□□ 0.71
COPE-202ENST00000349893 CACNB2Q08289 660 aaPredicted RBP19.51■□□□□ 0.71
COPE-202ENST00000349893 COPRSQ9NQ92 184 aa19.51■□□□□ 0.71
COPE-202ENST00000349893 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
COPE-202ENST00000349893 SIPA1L1O43166 1804 aa19.51■□□□□ 0.71
COPE-202ENST00000349893 FRMPD3Q5JV73 1810 aa19.51■□□□□ 0.71
COPE-202ENST00000349893 CDH23Q9H251 3354 aa19.5■□□□□ 0.71
COPE-202ENST00000349893 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
COPE-202ENST00000349893 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
COPE-202ENST00000349893 TXNRD2Q9NNW7 524 aa19.5■□□□□ 0.71
COPE-202ENST00000349893 ZKSCAN1P17029 563 aaPredicted RBP19.49■□□□□ 0.71
COPE-202ENST00000349893 MAPK4P31152 587 aa19.49■□□□□ 0.71
COPE-202ENST00000349893 BACE1P56817 501 aa19.49■□□□□ 0.71
COPE-202ENST00000349893 IRX3P78415 501 aaPredicted RBP19.49■□□□□ 0.71
COPE-202ENST00000349893 MORN1Q5T089 497 aa19.49■□□□□ 0.71
COPE-202ENST00000349893 ERICH6Q7L0X2 663 aa19.49■□□□□ 0.71
COPE-202ENST00000349893 P2RX7Q99572 595 aaKnown RBP19.49■□□□□ 0.71
COPE-202ENST00000349893 UBTFL1P0CB47 393 aaPredicted RBP19.48■□□□□ 0.71
COPE-202ENST00000349893 TIMM10P62072 90 aa19.48■□□□□ 0.71
COPE-202ENST00000349893 HERVK_113P62684 666 aa19.48■□□□□ 0.71
COPE-202ENST00000349893 MDM2Q00987 491 aaPredicted RBP19.48■□□□□ 0.71
COPE-202ENST00000349893 MTMR2Q13614 643 aa19.48■□□□□ 0.71
COPE-202ENST00000349893 NSUN4Q96CB9 384 aaKnown RBP19.48■□□□□ 0.71
COPE-202ENST00000349893 RBPJLQ9UBG7 517 aa19.48■□□□□ 0.71
COPE-202ENST00000349893 PA2G4Q9UQ80 394 aaKnown RBP19.48■□□□□ 0.71
COPE-202ENST00000349893 MUC3AQ02505 3323 aa19.48■□□□□ 0.71
COPE-202ENST00000349893 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
COPE-202ENST00000349893 GSTO1P78417 241 aa19.47■□□□□ 0.71
COPE-202ENST00000349893 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
COPE-202ENST00000349893 METTL16Q86W50 562 aaKnown RBP19.47■□□□□ 0.71
COPE-202ENST00000349893 TTC28Q96AY4 2481 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 A0A1B0GUL7 405 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 C19orf81C9J6K1 198 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 PEX10O60683 326 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 LDHCP07864 332 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 ASNSP08243 561 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 RGS2P41220 211 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
COPE-202ENST00000349893 POTEEQ6S8J3 1075 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms