RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NR5A1Q13285 461 aa24.71■■□□□ 1.55
CCDC38-201ENST00000344280 ZNF654Q8IZM8 581 aa24.71■■□□□ 1.55
CCDC38-201ENST00000344280 CRACR2BQ8N4Y2 399 aaPredicted RBP24.71■■□□□ 1.55
CCDC38-201ENST00000344280 XPO4Q9C0E2 1151 aaKnown RBP24.71■■□□□ 1.55
CCDC38-201ENST00000344280 MINPP1Q9UNW1 487 aa24.71■■□□□ 1.55
CCDC38-201ENST00000344280 ERICH2A1L162 156 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 SKILP12757 684 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 KLRK1P26718 216 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 LONRF3Q496Y0 759 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 PTF1AQ7RTS3 328 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 ARID3AQ99856 593 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 TUBE1Q9UJT0 475 aa24.7■■□□□ 1.55
CCDC38-201ENST00000344280 FAM237AA0A1B0GTK4 181 aa24.7■■□□□ 1.54
CCDC38-201ENST00000344280 CLEC4GQ6UXB4 293 aa24.7■■□□□ 1.54
CCDC38-201ENST00000344280 FANCBQ8NB91 859 aa24.7■■□□□ 1.54
CCDC38-201ENST00000344280 HSD3B7Q9H2F3 369 aa24.7■■□□□ 1.54
CCDC38-201ENST00000344280 BSDC1Q9NW68 430 aaPredicted RBP24.7■■□□□ 1.54
CCDC38-201ENST00000344280 IFNKQ9P0W0 207 aa24.7■■□□□ 1.54
CCDC38-201ENST00000344280 SF3B3Q15393 1217 aaKnown RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 METTL16Q86W50 562 aaKnown RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 FOXP4Q8IVH2 680 aaPredicted RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 TRIM22Q8IYM9 498 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 SHISA4Q96DD7 197 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 FAM84BQ96KN1 310 aaPredicted RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 RNF41Q9H4P4 317 aaPredicted RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 TNKSO95271 1327 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 CACNA1SQ13698 1873 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 SMC2O95347 1197 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 TNNT1P13805 278 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 SEC23AQ15436 765 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 TPD52L1Q16890 204 aaPredicted RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 BARGINQ6ZT62 677 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 OXER1Q8TDS5 423 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 WASF1Q92558 559 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 SMARCC1Q92922 1105 aaPredicted RBP24.69■■□□□ 1.54
CCDC38-201ENST00000344280 UBAC1Q9BSL1 405 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 BCL2L12Q9HB09 334 aa24.69■■□□□ 1.54
CCDC38-201ENST00000344280 COL5A3P25940 1745 aaPredicted RBP24.68■■□□□ 1.54
CCDC38-201ENST00000344280 FOXN1O15353 648 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 CUTAO60888 179 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 EVX2Q03828 476 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 UBE4AQ14139 1066 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 TBC1D9BQ66K14 1250 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 KCNH3Q9ULD8 1083 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 PRDM1O75626 825 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 ATP1A3P13637 1013 aa24.68■■□□□ 1.54
CCDC38-201ENST00000344280 LMOD1P29536 600 aaPredicted RBP24.68■■□□□ 1.54
CCDC38-201ENST00000344280 DEXIO95424 95 aa24.67■■□□□ 1.54
CCDC38-201ENST00000344280 FAM98CQ17RN3 349 aaKnown RBP24.67■■□□□ 1.54
CCDC38-201ENST00000344280 GNL3LQ9NVN8 582 aaKnown RBP24.67■■□□□ 1.54
CCDC38-201ENST00000344280 A0A1B0GUL6 1792 aa24.67■■□□□ 1.54
CCDC38-201ENST00000344280 BAZ2AQ9UIF9 1905 aaKnown RBP24.67■■□□□ 1.54
CCDC38-201ENST00000344280 CCDC24Q8N4L8 307 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 KRI1Q8N9T8 703 aaKnown RBP24.66■■□□□ 1.54
CCDC38-201ENST00000344280 ANAPC4Q9UJX5 808 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 PCDHB6Q9Y5E3 794 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 NEMFO60524 1076 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 SAFBQ15424 915 aaKnown RBP eCLIP24.66■■□□□ 1.54
CCDC38-201ENST00000344280 KRBA2Q6ZNG9 492 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 TMTC2Q8N394 836 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 ENAHQ8N8S7 591 aaPredicted RBP24.66■■□□□ 1.54
CCDC38-201ENST00000344280 MAP7D2Q96T17 732 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 MYH2Q9UKX2 1941 aa24.66■■□□□ 1.54
CCDC38-201ENST00000344280 hCG_1642624A0A1W2PR95 340 aa24.65■■□□□ 1.54
CCDC38-201ENST00000344280 CAVIN4Q5BKX8 364 aa24.65■■□□□ 1.54
CCDC38-201ENST00000344280 ESR2Q92731 530 aa24.65■■□□□ 1.54
CCDC38-201ENST00000344280 OSBPL5Q9H0X9 879 aaPredicted RBP24.65■■□□□ 1.54
CCDC38-201ENST00000344280 TMC6Q7Z403 805 aa24.65■■□□□ 1.54
CCDC38-201ENST00000344280 MTA3Q9BTC8 594 aa24.65■■□□□ 1.54
CCDC38-201ENST00000344280 FOXP1Q9H334 677 aaPredicted RBP24.65■■□□□ 1.54
CCDC38-201ENST00000344280 CASZ1Q86V15 1759 aa24.65■■□□□ 1.54
CCDC38-201ENST00000344280 CCDC196A0A1B0GTZ2 297 aa24.64■■□□□ 1.54
CCDC38-201ENST00000344280 ATP2B1P20020 1258 aa24.64■■□□□ 1.54
CCDC38-201ENST00000344280 GTF2E1P29083 439 aaPredicted RBP24.64■■□□□ 1.54
CCDC38-201ENST00000344280 CNNM3Q8NE01 707 aa24.64■■□□□ 1.54
CCDC38-201ENST00000344280 TRMT1Q9NXH9 659 aaKnown RBP24.64■■□□□ 1.54
CCDC38-201ENST00000344280 FBXO2Q9UK22 296 aaPredicted RBP24.64■■□□□ 1.54
CCDC38-201ENST00000344280 PCDHA5Q9Y5H7 936 aa24.64■■□□□ 1.54
CCDC38-201ENST00000344280 BMP6P22004 513 aa24.64■■□□□ 1.53
CCDC38-201ENST00000344280 SRP68Q9UHB9 627 aaKnown RBP24.64■■□□□ 1.53
CCDC38-201ENST00000344280 FAM205CA6NFA0 338 aa24.63■■□□□ 1.53
CCDC38-201ENST00000344280 SMTNL1A8MU46 457 aa24.63■■□□□ 1.53
CCDC38-201ENST00000344280 ARMCX5Q6P1M9 558 aa24.63■■□□□ 1.53
CCDC38-201ENST00000344280 ZSCAN10Q96SZ4 725 aaPredicted RBP24.63■■□□□ 1.53
CCDC38-201ENST00000344280 IKBKBO14920 756 aa24.63■■□□□ 1.53
CCDC38-201ENST00000344280 CTIFO43310 598 aaKnown RBP24.62■■□□□ 1.53
CCDC38-201ENST00000344280 PTPREP23469 700 aa24.62■■□□□ 1.53
CCDC38-201ENST00000344280 FANCCQ00597 558 aa24.62■■□□□ 1.53
CCDC38-201ENST00000344280 MDM2Q00987 491 aaPredicted RBP24.62■■□□□ 1.53
CCDC38-201ENST00000344280 PKN1Q16512 942 aa24.62■■□□□ 1.53
CCDC38-201ENST00000344280 RILPL1Q5EBL4 403 aa24.62■■□□□ 1.53
CCDC38-201ENST00000344280 CABP5Q9NP86 173 aa24.62■■□□□ 1.53
CCDC38-201ENST00000344280 VPS54Q9P1Q0 977 aa24.62■■□□□ 1.53
CCDC38-201ENST00000344280 PLEKHA8P1O95397 391 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 RCAN1P53805 252 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 CTR9Q6PD62 1173 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 DPF2Q92785 391 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 TFCP2L1Q9NZI6 479 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 IMPACTQ9P2X3 320 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 DUOX1Q9NRD9 1551 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms