RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 COL2A1P02458 1487 aaPredicted RBP12.4□□□□□ -0.43
SNRPD2-201ENST00000342669 MAST2Q6P0Q8 1798 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 CCL5P13501 91 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 TBC1D2Q9BYX2 928 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 CDK5RAP2Q96SN8 1893 aa12.39□□□□□ -0.43
SNRPD2-201ENST00000342669 FAM196BA6NMK8 535 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 BAG3O95817 575 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 GJB1P08034 283 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 PLCG2P16885 1265 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 SPP2Q13103 211 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 POLA2Q14181 598 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 CCDC84Q86UT8 332 aaPredicted RBP12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 SH3RF3Q8TEJ3 882 aaPredicted RBP12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 RNF208Q9H0X6 261 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 GABRQQ9UN88 632 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
SNRPD2-201ENST00000342669 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 CAP2P40123 477 aa12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 GJA8P48165 433 aa12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.439e-13■■□□□ 13.8
SNRPD2-201ENST00000342669 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 AATFQ9NY61 560 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 CEP290O15078 2479 aa12.37□□□□□ -0.43
SNRPD2-201ENST00000342669 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 ADCY3O60266 1144 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 GCLCP48506 637 aaPredicted RBP12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 FLT3LGP49771 235 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 PPP4CP60510 307 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 DPF3Q92784 378 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 COA7Q96BR5 231 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
SNRPD2-201ENST00000342669 MYH1P12882 1939 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 SIPA1L1O43166 1804 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 H0YGN5 161 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 IGSF3O75054 1194 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 HMGCS2P54868 508 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 HNRNPUQ00839 825 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 IRF5Q13568 498 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 FAM110CQ1W6H9 321 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 ITPRIPQ8IWB1 547 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 TGFBRAP1Q8WUH2 860 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 HTATIP2Q9BUP3 242 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
SNRPD2-201ENST00000342669 INHAP05111 366 aa12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 CYP2E1P05181 493 aaPredicted RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 ASNSP08243 561 aa12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 ELNP15502 786 aa12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 CAPN2P17655 700 aa12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 U2AF1L4Q8WU68 220 aaKnown RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 FLT1P17948 1338 aa12.34□□□□□ -0.43
SNRPD2-201ENST00000342669 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 FARP2O94887 1054 aaPredicted RBP12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 SGPL1O95470 568 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 ZAP70P43403 619 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 UBE2Q1Q7Z7E8 422 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 ASCC2Q9H1I8 757 aaPredicted RBP12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 PIH1D3Q9NQM4 214 aaKnown RBP12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 GINM1Q9NU53 330 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 DBNLQ9UJU6 430 aaKnown RBP12.33□□□□□ -0.44
SNRPD2-201ENST00000342669 TFRCP02786 760 aaKnown RBP12.32□□□□□ -0.44
SNRPD2-201ENST00000342669 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
SNRPD2-201ENST00000342669 RLBP1P12271 317 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms