RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 CCDC196A0A1B0GTZ2 297 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 NDUFA8P51970 172 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 UBASH3AP57075 661 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 ITPK1Q13572 414 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 HSP90B2PQ58FF3 399 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 ATP5JP18859 108 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 SATB1Q01826 763 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 VSTM4Q8IW00 320 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 CCDC85AQ96PX6 553 aaPredicted RBP17.53■□□□□ 0.4
LIMK2-203ENST00000340552 PCDHA7Q9UN72 937 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
LIMK2-203ENST00000340552 CCDC189A1A4V9 331 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 ERLIN1O75477 346 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 TDO2P48775 406 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 NLRP12P59046 1061 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 FBXW10Q5XX13 1052 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 SMARCC1Q92922 1105 aaPredicted RBP17.52■□□□□ 0.4
LIMK2-203ENST00000340552 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.4
LIMK2-203ENST00000340552 USP21Q9UK80 565 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 GOLGA6L9A6NEM1 432 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 WDHD1O75717 1129 aaPredicted RBP17.52■□□□□ 0.4
LIMK2-203ENST00000340552 KARSQ15046 597 aaKnown RBP17.52■□□□□ 0.4
LIMK2-203ENST00000340552 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
LIMK2-203ENST00000340552 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.4
LIMK2-203ENST00000340552 MYH14Q7Z406 1995 aaKnown RBP17.52■□□□□ 0.39
LIMK2-203ENST00000340552 HIP1O00291 1037 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 CIAO1O76071 339 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 CSF1RP07333 972 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
LIMK2-203ENST00000340552 LRRIQ3A6PVS8 624 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-203ENST00000340552 TOP1P11387 765 aaKnown RBP17.51■□□□□ 0.39
LIMK2-203ENST00000340552 VSNL1P62760 191 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 GPR108Q9NPR9 543 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 SERPINC1P01008 464 aa17.51■□□□□ 0.39
LIMK2-203ENST00000340552 BAG1Q99933 345 aaPredicted RBP17.51■□□□□ 0.39
LIMK2-203ENST00000340552 TIMM10P62072 90 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
LIMK2-203ENST00000340552 ILDR1Q86SU0 546 aaPredicted RBP17.5■□□□□ 0.39
LIMK2-203ENST00000340552 EDC3Q96F86 508 aaKnown RBP17.5■□□□□ 0.39
LIMK2-203ENST00000340552 DESI2Q9BSY9 194 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 POTEB2H3BUK9 544 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 IKBKBO14920 756 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 RNF40O75150 1001 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 SCRN1Q12765 414 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
LIMK2-203ENST00000340552 ZNF34Q8IZ26 560 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 CERKQ8TCT0 537 aa17.5■□□□□ 0.39
LIMK2-203ENST00000340552 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
LIMK2-203ENST00000340552 UBN2Q6ZU65 1347 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
LIMK2-203ENST00000340552 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
LIMK2-203ENST00000340552 RHOXF2BP0C7M4 288 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 RHOXF2Q9BQY4 288 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 MYH3P11055 1940 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
LIMK2-203ENST00000340552 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
LIMK2-203ENST00000340552 AFAP1L1Q8TED9 768 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
LIMK2-203ENST00000340552 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 NDUFB9Q9Y6M9 179 aa17.49■□□□□ 0.39
LIMK2-203ENST00000340552 CBFA2T2O43439 604 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 TFRCP02786 760 aaKnown RBP17.48■□□□□ 0.39
LIMK2-203ENST00000340552 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 FAM107BQ9H098 131 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 INTS13Q9NVM9 706 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 BCCIPQ9P287 314 aaKnown RBP eCLIP17.48■□□□□ 0.39
LIMK2-203ENST00000340552 RREB1Q92766 1687 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 CTSWP56202 376 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 Q6ZUG5 572 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 ZNF609O15014 1411 aa17.48■□□□□ 0.39
LIMK2-203ENST00000340552 SYF2O95926 243 aaKnown RBP17.47■□□□□ 0.39
LIMK2-203ENST00000340552 GUCY1B3Q02153 619 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 HAUS7Q99871 368 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
LIMK2-203ENST00000340552 CEP112Q8N8E3 955 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 GREM2Q9H772 168 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 CDC23Q9UJX2 597 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 FAM169AQ9Y6X4 670 aa17.47■□□□□ 0.39
LIMK2-203ENST00000340552 ITGA6P23229 1130 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 ATL3Q6DD88 541 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
LIMK2-203ENST00000340552 SEC62Q99442 399 aaKnown RBP17.46■□□□□ 0.39
LIMK2-203ENST00000340552 A0A1W2PQ27 194 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 A0A1W2PQ64 194 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 A0A1W2PQD8 194 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 STX10O60499 249 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 PDE8AO60658 829 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 CTDNEP1O95476 244 aa17.46■□□□□ 0.39
LIMK2-203ENST00000340552 CCT5P48643 541 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms