RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TUBB4AP04350 444 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 CYB5R4Q7L1T6 521 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 MIGA1Q8NAN2 632 aa21.63■■□□□ 1.05
PSPC1-201ENST00000338910 GOLGA8BA8MQT2 603 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 B4E1Z4 1266 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 ZRANB2O95218 330 aaKnown RBP eCLIP21.62■■□□□ 1.051e-6■■■■■ 28
PSPC1-201ENST00000338910 ATL3Q6DD88 541 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 FSIP1Q8NA03 581 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 ERCC4Q92889 916 aaPredicted RBP21.62■■□□□ 1.05
PSPC1-201ENST00000338910 NAPBQ9H115 298 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 EPB41L4AQ9HCS5 686 aaPredicted RBP21.62■■□□□ 1.05
PSPC1-201ENST00000338910 HPS5Q9UPZ3 1129 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 SALL1Q9NSC2 1324 aa21.62■■□□□ 1.05
PSPC1-201ENST00000338910 FDPSP14324 419 aaKnown RBP21.61■■□□□ 1.05
PSPC1-201ENST00000338910 CAPN2P17655 700 aa21.61■■□□□ 1.05
PSPC1-201ENST00000338910 ARHGAP29Q52LW3 1261 aa21.61■■□□□ 1.05
PSPC1-201ENST00000338910 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.61■■□□□ 1.05
PSPC1-201ENST00000338910 UBE4AQ14139 1066 aa21.61■■□□□ 1.05
PSPC1-201ENST00000338910 LCORLQ8N3X6 602 aa21.61■■□□□ 1.05
PSPC1-201ENST00000338910 CTDSPL2Q05D32 466 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 VPS37DQ86XT2 251 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 XPO4Q9C0E2 1151 aaKnown RBP21.6■■□□□ 1.05
PSPC1-201ENST00000338910 CARMIL3Q8ND23 1372 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 GSG1L2A8MUP6 293 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 ADRA2BP18089 450 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 SFPQP23246 707 aaKnown RBP eCLIP21.6■■□□□ 1.051e-7■□□□□ 8.6
PSPC1-201ENST00000338910 TM4SF1P30408 202 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 SLC27A3Q5K4L6 730 aa21.6■■□□□ 1.05
PSPC1-201ENST00000338910 FMR1NBQ8N0W7 255 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-201ENST00000338910 ZNF396Q96N95 335 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-201ENST00000338910 GNL3LQ9NVN8 582 aaKnown RBP21.6■■□□□ 1.05
PSPC1-201ENST00000338910 HNRNPH2P55795 449 aaKnown RBP21.59■■□□□ 1.05
PSPC1-201ENST00000338910 ALX1Q15699 326 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 CHMP4CQ96CF2 233 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 BPIFA3Q9BQP9 254 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 SLC4A4Q9Y6R1 1079 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 VGLL3A8MV65 326 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 ME1P48163 572 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 CAVIN4Q5BKX8 364 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 TMC6Q7Z403 805 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 RAI14Q9P0K7 980 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 NEDD4P46934 1319 aa21.59■■□□□ 1.05
PSPC1-201ENST00000338910 CPLX1O14810 134 aa21.58■■□□□ 1.05
PSPC1-201ENST00000338910 CYP7A1P22680 504 aa21.58■■□□□ 1.05
PSPC1-201ENST00000338910 STK11IPQ8N1F8 1099 aa21.58■■□□□ 1.05
PSPC1-201ENST00000338910 CNBD1Q8NA66 436 aa21.58■■□□□ 1.05
PSPC1-201ENST00000338910 FBXW7Q969H0 707 aa21.58■■□□□ 1.05
PSPC1-201ENST00000338910 IFNKQ9P0W0 207 aa21.58■■□□□ 1.05
PSPC1-201ENST00000338910 ORC3Q9UBD5 711 aaPredicted RBP21.58■■□□□ 1.05
PSPC1-201ENST00000338910 ANGEL1Q9UNK9 670 aaKnown RBP21.58■■□□□ 1.05
PSPC1-201ENST00000338910 ZNF804BA4D1E1 1349 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 WDR19Q8NEZ3 1342 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 DHX16O60231 1041 aaKnown RBP21.58■■□□□ 1.04
PSPC1-201ENST00000338910 GYS1P13807 737 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 ETF1P62495 437 aaKnown RBP21.58■■□□□ 1.04
PSPC1-201ENST00000338910 DHX8Q14562 1220 aaKnown RBP21.58■■□□□ 1.04
PSPC1-201ENST00000338910 DPCR1Q3MIW9 517 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 OTUD7BQ6GQQ9 843 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 ADGRA1Q86SQ6 560 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 PROM2Q8N271 834 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 FAM84BQ96KN1 310 aaPredicted RBP21.58■■□□□ 1.04
PSPC1-201ENST00000338910 SENP2Q9HC62 589 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 A0A1B0GUL6 1792 aa21.58■■□□□ 1.04
PSPC1-201ENST00000338910 UBR3Q6ZT12 1888 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 PHLPP2Q6ZVD8 1323 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 SMC2O95347 1197 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 KLRK1P26718 216 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 ILDR1Q86SU0 546 aaPredicted RBP21.57■■□□□ 1.04
PSPC1-201ENST00000338910 RXRAP19793 462 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 TDO2P48775 406 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 MRPS27Q92552 414 aaKnown RBP21.57■■□□□ 1.04
PSPC1-201ENST00000338910 TACC3Q9Y6A5 838 aa21.57■■□□□ 1.04
PSPC1-201ENST00000338910 TMCO3Q6UWJ1 677 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 SDF4Q9BRK5 362 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 ARGLU1Q9NWB6 273 aaPredicted RBP21.56■■□□□ 1.04
PSPC1-201ENST00000338910 KIAA1468Q9P260 1216 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 DOCK2Q92608 1830 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 SH2B2O14492 632 aaPredicted RBP21.56■■□□□ 1.04
PSPC1-201ENST00000338910 TXNRD1Q16881 649 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 UBXN4Q92575 508 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 NACAP1Q9BZK3 213 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 ZSWIM5Q9P217 1185 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 PCDHA7Q9UN72 937 aa21.56■■□□□ 1.04
PSPC1-201ENST00000338910 TNRC6CQ9HCJ0 1690 aaKnown RBP21.56■■□□□ 1.04
PSPC1-201ENST00000338910 NRDCO43847 1150 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 GNAT2P19087 354 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 RRP12Q5JTH9 1297 aaKnown RBP21.55■■□□□ 1.04
PSPC1-201ENST00000338910 PRR5LQ6MZQ0 368 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 SLC51AQ86UW1 340 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 IGDCC4Q8TDY8 1250 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 UBXN6Q9BZV1 441 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 TOMM22Q9NS69 142 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 GJB4Q9NTQ9 266 aa21.55■■□□□ 1.04
PSPC1-201ENST00000338910 PNPLA7Q6ZV29 1317 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 A0A1W2PQ27 194 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 A0A1W2PQ64 194 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 A0A1W2PQD8 194 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 ADALQ6DHV7 355 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 NFXL1Q6ZNB6 911 aa21.54■■□□□ 1.04
PSPC1-201ENST00000338910 MFSD6Q6ZSS7 791 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms