RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 OTUD7AQ8TE49 926 aaPredicted RBP18.53■□□□□ 0.56
PRKN-201ENST00000338468 ECHDC1Q9NTX5 307 aa18.53■□□□□ 0.56
PRKN-201ENST00000338468 ZNF532Q9HCE3 1301 aa18.52■□□□□ 0.56
PRKN-201ENST00000338468 GTF2A2P52657 109 aa18.52■□□□□ 0.56
PRKN-201ENST00000338468 PPATQ06203 517 aa18.52■□□□□ 0.56
PRKN-201ENST00000338468 RRP1BQ14684 758 aaKnown RBP18.52■□□□□ 0.56
PRKN-201ENST00000338468 TRIM17Q9Y577 477 aa18.52■□□□□ 0.56
PRKN-201ENST00000338468 CCL15-CCL14A0A0B4J2E2 113 aa18.51■□□□□ 0.55
PRKN-201ENST00000338468 AAMPQ13685 434 aa18.51■□□□□ 0.55
PRKN-201ENST00000338468 CCL15Q16663 113 aa18.51■□□□□ 0.55
PRKN-201ENST00000338468 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
PRKN-201ENST00000338468 MKI67P46013 3256 aaKnown RBP18.5■□□□□ 0.55
PRKN-201ENST00000338468 ADD2P35612 726 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
PRKN-201ENST00000338468 CERS3Q8IU89 383 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
PRKN-201ENST00000338468 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKN-201ENST00000338468 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.5■□□□□ 0.55
PRKN-201ENST00000338468 PI4KBQ9UBF8 816 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 SAP30BPQ9UHR5 308 aaKnown RBP18.5■□□□□ 0.55
PRKN-201ENST00000338468 PALD1Q9ULE6 856 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 KCNH4Q9UQ05 1017 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 DOCK1Q14185 1865 aa18.5■□□□□ 0.55
PRKN-201ENST00000338468 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 CTNND1O60716 968 aaKnown RBP18.49■□□□□ 0.55
PRKN-201ENST00000338468 PTPRAP18433 802 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 MOGSQ13724 837 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 FAM43AQ8N2R8 423 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 PHIPQ8WWQ0 1821 aa18.49■□□□□ 0.55
PRKN-201ENST00000338468 DDX60LQ5H9U9 1706 aaKnown RBP18.49■□□□□ 0.55
PRKN-201ENST00000338468 CETPP11597 493 aa18.48■□□□□ 0.55
PRKN-201ENST00000338468 CRHR2Q13324 411 aa18.48■□□□□ 0.55
PRKN-201ENST00000338468 SNAPC2Q13487 334 aa18.48■□□□□ 0.55
PRKN-201ENST00000338468 LCORLQ8N3X6 602 aa18.48■□□□□ 0.55
PRKN-201ENST00000338468 PI4K2BQ8TCG2 481 aa18.48■□□□□ 0.55
PRKN-201ENST00000338468 HERC5Q9UII4 1024 aaKnown RBP18.48■□□□□ 0.55
PRKN-201ENST00000338468 MYH7P12883 1935 aa18.48■□□□□ 0.55
PRKN-201ENST00000338468 MYH1P12882 1939 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 CENPFP49454 3210 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 IGHDP01880 384 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 USP5P45974 858 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
PRKN-201ENST00000338468 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 CCDC84Q86UT8 332 aaPredicted RBP18.47■□□□□ 0.55
PRKN-201ENST00000338468 ERO1AQ96HE7 468 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 AFG3L2Q9Y4W6 797 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 ZHX2Q9Y6X8 837 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 RBBP6Q7Z6E9 1792 aaKnown RBP18.47■□□□□ 0.55
PRKN-201ENST00000338468 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
PRKN-201ENST00000338468 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 BTBD19C9JJ37 291 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 CAP2P40123 477 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 JAG1P78504 1218 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 UBE3CQ15386 1083 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 OTUD7BQ6GQQ9 843 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
PRKN-201ENST00000338468 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.46■□□□□ 0.55
PRKN-201ENST00000338468 ARMT1Q9H993 441 aa18.46■□□□□ 0.55
PRKN-201ENST00000338468 ATAD5Q96QE3 1844 aa18.45■□□□□ 0.54
PRKN-201ENST00000338468 CXCL11O14625 94 aa18.45■□□□□ 0.54
PRKN-201ENST00000338468 EVX2Q03828 476 aa18.45■□□□□ 0.54
PRKN-201ENST00000338468 SHROOM1Q2M3G4 852 aaPredicted RBP18.45■□□□□ 0.54
PRKN-201ENST00000338468 SMC5Q8IY18 1101 aa18.45■□□□□ 0.54
PRKN-201ENST00000338468 KBTBD3Q8NAB2 608 aa18.45■□□□□ 0.54
PRKN-201ENST00000338468 NAV1Q8NEY1 1877 aa18.45■□□□□ 0.54
PRKN-201ENST00000338468 PRKAB2O43741 272 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 MBD4O95243 580 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 MX1P20591 662 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 GPAT2Q6NUI2 795 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 SDR42E1Q8WUS8 393 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 CRNKL1Q9BZJ0 848 aaKnown RBP18.44■□□□□ 0.54
PRKN-201ENST00000338468 PUS7LQ9H0K6 701 aaKnown RBP18.44■□□□□ 0.54
PRKN-201ENST00000338468 PTPN22Q9Y2R2 807 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 PTPRFP10586 1907 aa18.44■□□□□ 0.54
PRKN-201ENST00000338468 BRCA2P51587 3418 aa18.43■□□□□ 0.54
PRKN-201ENST00000338468 A0A0G2JLL6 359 aaPredicted RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 HLA-DOAP06340 250 aa18.43■□□□□ 0.54
PRKN-201ENST00000338468 PLCD1P51178 756 aa18.43■□□□□ 0.54
PRKN-201ENST00000338468 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 TAF1CQ15572 869 aaPredicted RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 PRRT2Q7Z6L0 340 aaPredicted RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 CD99L2Q8TCZ2 262 aa18.43■□□□□ 0.54
PRKN-201ENST00000338468 EHD4Q9H223 541 aa18.43■□□□□ 0.54
PRKN-201ENST00000338468 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 ZCCHC17Q9NP64 241 aaKnown RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
PRKN-201ENST00000338468 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
PRKN-201ENST00000338468 CAP1Q01518 475 aa18.42■□□□□ 0.54
PRKN-201ENST00000338468 ZSCAN25Q6NSZ9 544 aa18.42■□□□□ 0.54
PRKN-201ENST00000338468 ANKRD23Q86SG2 305 aa18.42■□□□□ 0.54
PRKN-201ENST00000338468 CRACR2BQ8N4Y2 399 aaPredicted RBP18.42■□□□□ 0.54
PRKN-201ENST00000338468 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
PRKN-201ENST00000338468 EFCC1Q9HA90 598 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms