RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 CNOT10Q9H9A5 744 aaKnown RBP6.84□□□□□ -1.31
CSMD1-201ENST00000335551 DNMBPQ6XZF7 1577 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 HMGXB3Q12766 1538 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 RAD51AP2Q09MP3 1159 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 PIK3R4Q99570 1358 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 PRG4Q92954 1404 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-201ENST00000335551 CALM1P0DP23 149 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 CALM2P0DP24 149 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 CALM3P0DP25 149 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 TXNDC2Q86VQ3 553 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 MAIP1Q8WWC4 291 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 MYH11P35749 1972 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 TBC1D8O95759 1140 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 HLA-DOAP06340 250 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 GFM2Q969S9 779 aaKnown RBP6.84□□□□□ -1.31
CSMD1-201ENST00000335551 RRP36Q96EU6 259 aaKnown RBP6.84□□□□□ -1.31
CSMD1-201ENST00000335551 ANKRD36BQ8N2N9 1353 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 SLC12A2P55011 1212 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 SLC8A3P57103 927 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 CNTRLQ7Z7A1 2325 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.31
CSMD1-201ENST00000335551 KIF14Q15058 1648 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 CCT6AP40227 531 aaKnown RBP6.84□□□□□ -1.31
CSMD1-201ENST00000335551 MUM1L1Q5H9M0 696 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 DHX58Q96C10 678 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 KRT12Q99456 494 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 BCL2L12Q9HB09 334 aa6.84□□□□□ -1.31
CSMD1-201ENST00000335551 HMGB3O15347 200 aaKnown RBP6.84□□□□□ -1.32
CSMD1-201ENST00000335551 NEK2P51955 445 aa6.84□□□□□ -1.32
CSMD1-201ENST00000335551 GSTO1P78417 241 aa6.84□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC51Q96ER9 411 aa6.84□□□□□ -1.32
CSMD1-201ENST00000335551 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.32
CSMD1-201ENST00000335551 KLF18A0A0U1RQI7 1052 aa6.84□□□□□ -1.32
CSMD1-201ENST00000335551 LMNB1P20700 586 aa6.84□□□□□ -1.32
CSMD1-201ENST00000335551 LONP1P36776 959 aaKnown RBP6.84□□□□□ -1.32
CSMD1-201ENST00000335551 IFIH1Q9BYX4 1025 aaKnown RBP6.84□□□□□ -1.32
CSMD1-201ENST00000335551 NSD2O96028 1365 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 SLC9C1Q4G0N8 1177 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 SAR1BQ9Y6B6 198 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 HGSO14964 777 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ESCO1Q5FWF5 840 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 IFIT1BQ5T764 474 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 AQRO60306 1485 aaKnown RBP eCLIP6.83□□□□□ -1.323e-7■■■■■ 34.7
CSMD1-201ENST00000335551 TSPY2A6NKD2 308 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 B4DLN1 442 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 MRPL12P52815 198 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 DCAF17Q5H9S7 520 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC105Q8IYK2 499 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 JPH2Q9BR39 696 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC169A6NNP5 214 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ASIC2Q16515 512 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 RSBN1LQ6PCB5 846 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 STK24Q9Y6E0 443 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 JADE1Q6IE81 842 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 PEX26Q7Z412 305 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ANKLE2Q86XL3 938 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 MGARPQ8TDB4 240 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 DDX54Q8TDD1 881 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 TUBB6Q9BUF5 446 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 PAIP2BQ9ULR5 123 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 LMNAP02545 664 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC125Q86Z20 511 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 CARD6Q9BX69 1037 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 COPG1Q9Y678 874 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM27P14373 513 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 NUTM2GQ5VZR2 741 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 KRT79Q5XKE5 535 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ICE2Q659A1 982 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 MMS22LQ6ZRQ5 1243 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC13Q8IYE1 715 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 SH3GL3Q99963 347 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ZNF692Q9BU19 519 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ACTR5Q9H9F9 607 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 A0A087WUV0 522 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 GNA11P29992 359 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ZNF445P59923 1031 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 RPS6KA1Q15418 735 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM58Q8NG06 486 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 GRK7Q8WTQ7 553 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 AFG3L2Q9Y4W6 797 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 IGF1RP08069 1367 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
CSMD1-201ENST00000335551 ANGPTL3Q9Y5C1 460 aa6.83□□□□□ -1.32
CSMD1-201ENST00000335551 PLCD1P51178 756 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NBPF9Q3BBW0 867 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TMCO5AQ8N6Q1 288 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NAP1L4Q99733 375 aaKnown RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TMEM232C9JQI7 657 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 CALUO43852 315 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 PROSER2Q86WR7 435 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 CRNKL1Q9BZJ0 848 aaKnown RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NUTM2BA6NNL0 878 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NUTM2EB1AL46 878 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 ATP8B1O43520 1251 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 RUNDC3BQ96NL0 473 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NOC4LQ9BVI4 516 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms