RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 MYO5AQ9Y4I1 1855 aaKnown RBP30.01■■■□□ 2.39
CDKN3-202ENST00000335183 COL2A1P02458 1487 aaPredicted RBP30■■■□□ 2.39
CDKN3-202ENST00000335183 CDK5RAP2Q96SN8 1893 aa30■■■□□ 2.39
CDKN3-202ENST00000335183 GJA8P48165 433 aa30■■■□□ 2.39
CDKN3-202ENST00000335183 TREML2Q5T2D2 321 aa30■■■□□ 2.39
CDKN3-202ENST00000335183 DPF3Q92784 378 aa30■■■□□ 2.39
CDKN3-202ENST00000335183 NOL10Q9BSC4 688 aaKnown RBP30■■■□□ 2.39
CDKN3-202ENST00000335183 ADCY3O60266 1144 aa29.99■■■□□ 2.39
CDKN3-202ENST00000335183 FLT3LGP49771 235 aa29.99■■■□□ 2.39
CDKN3-202ENST00000335183 TMEM57Q8N5G2 664 aa29.99■■■□□ 2.39
CDKN3-202ENST00000335183 ANKRD13CQ8N6S4 541 aa29.99■■■□□ 2.39
CDKN3-202ENST00000335183 PNMA3Q9UL41 463 aa29.99■■■□□ 2.39
CDKN3-202ENST00000335183 SPP2Q13103 211 aa29.98■■■□□ 2.39
CDKN3-202ENST00000335183 UNC93B1Q9H1C4 597 aa29.98■■■□□ 2.39
CDKN3-202ENST00000335183 SNRKQ9NRH2 765 aa29.98■■■□□ 2.39
CDKN3-202ENST00000335183 CEP290O15078 2479 aa29.98■■■□□ 2.39
CDKN3-202ENST00000335183 SIPA1L1O43166 1804 aa29.97■■■□□ 2.39
CDKN3-202ENST00000335183 ELNP15502 786 aa29.97■■■□□ 2.39
CDKN3-202ENST00000335183 FXR1P51114 621 aaKnown RBP eCLIP29.97■■■□□ 2.39
CDKN3-202ENST00000335183 OS9Q13438 667 aaPredicted RBP29.97■■■□□ 2.39
CDKN3-202ENST00000335183 TTC39AQ5SRH9 613 aa29.97■■■□□ 2.39
CDKN3-202ENST00000335183 ZKSCAN2Q63HK3 967 aa29.97■■■□□ 2.39
CDKN3-202ENST00000335183 SH3RF3Q8TEJ3 882 aaPredicted RBP29.97■■■□□ 2.39
CDKN3-202ENST00000335183 TAOK2Q9UL54 1235 aa29.97■■■□□ 2.39
CDKN3-202ENST00000335183 PROCA1Q8NCQ7 364 aaPredicted RBP29.96■■■□□ 2.39
CDKN3-202ENST00000335183 ZNF280CQ8ND82 737 aa29.96■■■□□ 2.39
CDKN3-202ENST00000335183 FOCADQ5VW36 1801 aa29.96■■■□□ 2.39
CDKN3-202ENST00000335183 CAP2P40123 477 aa29.95■■■□□ 2.39
CDKN3-202ENST00000335183 HMGCS2P54868 508 aa29.95■■■□□ 2.39
CDKN3-202ENST00000335183 NAA16Q6N069 864 aaPredicted RBP29.95■■■□□ 2.39
CDKN3-202ENST00000335183 U2AF1L4Q8WU68 220 aaKnown RBP29.95■■■□□ 2.39
CDKN3-202ENST00000335183 AATFQ9NY61 560 aaKnown RBP eCLIP29.95■■■□□ 2.39
CDKN3-202ENST00000335183 INHAP05111 366 aa29.94■■■□□ 2.38
CDKN3-202ENST00000335183 RRP1BQ14684 758 aaKnown RBP29.94■■■□□ 2.38
CDKN3-202ENST00000335183 TNNI3KQ59H18 835 aa29.94■■■□□ 2.38
CDKN3-202ENST00000335183 CCDC158Q5M9N0 1113 aa29.94■■■□□ 2.38
CDKN3-202ENST00000335183 COA7Q96BR5 231 aa29.94■■■□□ 2.38
CDKN3-202ENST00000335183 DBNDD2Q9BQY9 259 aa29.94■■■□□ 2.38
CDKN3-202ENST00000335183 FPGT-TNNI3KV9GXZ4 949 aa29.94■■■□□ 2.38
CDKN3-202ENST00000335183 USP17L5A8MUK1 530 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 BAG3O95817 575 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 POLA2Q14181 598 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 FAM110CQ1W6H9 321 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 PXYLP1Q8TE99 480 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 HTATIP2Q9BUP3 242 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 TBC1D2Q9BYX2 928 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 GPR108Q9NPR9 543 aa29.93■■■□□ 2.38
CDKN3-202ENST00000335183 HERC5Q9UII4 1024 aaKnown RBP29.93■■■□□ 2.38
CDKN3-202ENST00000335183 PABPC4Q13310 644 aaKnown RBP eCLIP29.92■■■□□ 2.384e-9■■■■□ 25.4
CDKN3-202ENST00000335183 IRF5Q13568 498 aa29.92■■■□□ 2.38
CDKN3-202ENST00000335183 C1orf115Q9H7X2 142 aa29.92■■■□□ 2.38
CDKN3-202ENST00000335183 AS3MTQ9HBK9 375 aa29.92■■■□□ 2.38
CDKN3-202ENST00000335183 PI4KBQ9UBF8 816 aa29.92■■■□□ 2.38
CDKN3-202ENST00000335183 SURF6O75683 361 aaKnown RBP29.91■■■□□ 2.38
CDKN3-202ENST00000335183 FARP2O94887 1054 aaPredicted RBP29.91■■■□□ 2.38
CDKN3-202ENST00000335183 SGPL1O95470 568 aa29.91■■■□□ 2.38
CDKN3-202ENST00000335183 CHRDL2Q6WN34 429 aa29.91■■■□□ 2.38
CDKN3-202ENST00000335183 UBE2Q1Q7Z7E8 422 aa29.91■■■□□ 2.38
CDKN3-202ENST00000335183 PLCG2P16885 1265 aa29.9■■■□□ 2.38
CDKN3-202ENST00000335183 ATP8B2P98198 1209 aa29.9■■■□□ 2.38
CDKN3-202ENST00000335183 MAPKAPK5Q8IW41 473 aa29.9■■■□□ 2.38
CDKN3-202ENST00000335183 SSH3Q8TE77 659 aa29.9■■■□□ 2.38
CDKN3-202ENST00000335183 TGFBRAP1Q8WUH2 860 aa29.9■■■□□ 2.38
CDKN3-202ENST00000335183 DHX36Q9H2U1 1008 aaKnown RBP29.9■■■□□ 2.38
CDKN3-202ENST00000335183 CYP2E1P05181 493 aaPredicted RBP29.89■■■□□ 2.38
CDKN3-202ENST00000335183 GCLCP48506 637 aaPredicted RBP29.88■■■□□ 2.37
CDKN3-202ENST00000335183 ADGRA1Q86SQ6 560 aa29.88■■■□□ 2.37
CDKN3-202ENST00000335183 DEFB118Q96PH6 123 aa29.88■■■□□ 2.37
CDKN3-202ENST00000335183 TRIM34Q9BYJ4 488 aa29.88■■■□□ 2.37
CDKN3-202ENST00000335183 ASCC2Q9H1I8 757 aaPredicted RBP29.88■■■□□ 2.37
CDKN3-202ENST00000335183 MYH1P12882 1939 aa29.87■■■□□ 2.37
CDKN3-202ENST00000335183 TFRCP02786 760 aaKnown RBP29.87■■■□□ 2.37
CDKN3-202ENST00000335183 SH3D19Q5HYK7 790 aa29.87■■■□□ 2.37
CDKN3-202ENST00000335183 FTSJ3Q8IY81 847 aaKnown RBP29.87■■■□□ 2.37
CDKN3-202ENST00000335183 TRIOBPQ9H2D6 2365 aa29.87■■■□□ 2.37
CDKN3-202ENST00000335183 FLT1P17948 1338 aa29.87■■■□□ 2.37
CDKN3-202ENST00000335183 ZAP70P43403 619 aa29.86■■■□□ 2.37
CDKN3-202ENST00000335183 PPP4CP60510 307 aa29.86■■■□□ 2.37
CDKN3-202ENST00000335183 MTMR2Q13614 643 aa29.86■■■□□ 2.37
CDKN3-202ENST00000335183 CRACR2BQ8N4Y2 399 aaPredicted RBP29.86■■■□□ 2.37
CDKN3-202ENST00000335183 ITPRIPQ8IWB1 547 aa29.85■■■□□ 2.37
CDKN3-202ENST00000335183 ASNSP08243 561 aa29.84■■■□□ 2.37
CDKN3-202ENST00000335183 WDR18Q9BV38 432 aa29.84■■■□□ 2.37
CDKN3-202ENST00000335183 DNAJC18Q9H819 358 aa29.84■■■□□ 2.37
CDKN3-202ENST00000335183 PIH1D3Q9NQM4 214 aaKnown RBP29.84■■■□□ 2.37
CDKN3-202ENST00000335183 TMOD4Q9NZQ9 345 aa29.84■■■□□ 2.37
CDKN3-202ENST00000335183 PALD1Q9ULE6 856 aa29.84■■■□□ 2.37
CDKN3-202ENST00000335183 NR2E3Q9Y5X4 410 aa29.84■■■□□ 2.37
CDKN3-202ENST00000335183 PLXNB2O15031 1838 aa29.83■■■□□ 2.37
CDKN3-202ENST00000335183 GDF11O95390 407 aa29.83■■■□□ 2.37
CDKN3-202ENST00000335183 IRX3P78415 501 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 FOXP4Q8IVH2 680 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 ZNF512BQ96KM6 892 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 CCDC8Q9H0W5 538 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 PAK6Q9NQU5 681 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 TLR7Q9NYK1 1049 aaKnown RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 RBM27Q9P2N5 1060 aaKnown RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 SAP30BPQ9UHR5 308 aaKnown RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 DBNLQ9UJU6 430 aaKnown RBP29.83■■■□□ 2.37
CDKN3-202ENST00000335183 BACE1P56817 501 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms