RNA–Protein interactions for RNA: ENST00000333425.10

PIF1-202, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 1 (best) BASIC

Gene PIF1, Length 2,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-202ENST00000333425 NBPF11Q86T75 865 aa23.39■■□□□ 1.33
PIF1-202ENST00000333425 AMIGO3Q86WK7 504 aa23.39■■□□□ 1.33
PIF1-202ENST00000333425 CRACR2BQ8N4Y2 399 aaPredicted RBP23.39■■□□□ 1.33
PIF1-202ENST00000333425 SPTLC3Q9NUV7 552 aa23.39■■□□□ 1.33
PIF1-202ENST00000333425 CLIP2Q9UDT6 1046 aa23.39■■□□□ 1.33
PIF1-202ENST00000333425 KCNJ14Q9UNX9 436 aa23.39■■□□□ 1.33
PIF1-202ENST00000333425 RTCBQ9Y3I0 505 aaKnown RBP23.39■■□□□ 1.33
PIF1-202ENST00000333425 ARHGEF1Q92888 912 aaKnown RBP23.38■■□□□ 1.33
PIF1-202ENST00000333425 TNKSO95271 1327 aa23.38■■□□□ 1.33
PIF1-202ENST00000333425 CCDC196A0A1B0GTZ2 297 aa23.38■■□□□ 1.33
PIF1-202ENST00000333425 BTBD18B2RXH4 712 aa23.38■■□□□ 1.33
PIF1-202ENST00000333425 SLC3A2P08195 630 aaKnown RBP23.38■■□□□ 1.33
PIF1-202ENST00000333425 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
PIF1-202ENST00000333425 SEC23AQ15436 765 aa23.38■■□□□ 1.33
PIF1-202ENST00000333425 ZRSR1Q15695 479 aaKnown RBP23.38■■□□□ 1.33
PIF1-202ENST00000333425 SARM1Q6SZW1 724 aa23.38■■□□□ 1.33
PIF1-202ENST00000333425 JMYQ8N9B5 988 aa23.38■■□□□ 1.33
PIF1-202ENST00000333425 NAT10Q9H0A0 1025 aaKnown RBP23.38■■□□□ 1.33
PIF1-202ENST00000333425 BTAF1O14981 1849 aa23.37■■□□□ 1.33
PIF1-202ENST00000333425 BAZ2AQ9UIF9 1905 aaKnown RBP23.37■■□□□ 1.33
PIF1-202ENST00000333425 SEMA3EO15041 775 aa23.37■■□□□ 1.33
PIF1-202ENST00000333425 MMP1P03956 469 aa23.37■■□□□ 1.33
PIF1-202ENST00000333425 FNBP4Q8N3X1 1017 aaPredicted RBP23.37■■□□□ 1.33
PIF1-202ENST00000333425 AOPEPQ8N6M6 819 aa23.37■■□□□ 1.33
PIF1-202ENST00000333425 BRIP1Q9BX63 1249 aa23.37■■□□□ 1.33
PIF1-202ENST00000333425 USP21Q9UK80 565 aa23.37■■□□□ 1.33
PIF1-202ENST00000333425 SAFBQ15424 915 aaKnown RBP eCLIP23.36■■□□□ 1.33
PIF1-202ENST00000333425 SHC4Q6S5L8 630 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 NOSTRINQ8IVI9 506 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 NSUN4Q96CB9 384 aaKnown RBP23.36■■□□□ 1.33
PIF1-202ENST00000333425 CLIC6Q96NY7 704 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 ANKRD2Q9GZV1 360 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 BIN1O00499 593 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 SYKP43405 635 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 MECOMQ03112 1051 aa23.36■■□□□ 1.33
PIF1-202ENST00000333425 CHAF1AQ13111 956 aaPredicted RBP23.36■■□□□ 1.33
PIF1-202ENST00000333425 PRDM1O75626 825 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 DEXIO95424 95 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 DPCR1Q3MIW9 517 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 CTR9Q6PD62 1173 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 DIS3L2Q8IYB7 885 aaKnown RBP23.35■■□□□ 1.33
PIF1-202ENST00000333425 MYH2Q9UKX2 1941 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 UQCRHLA0A096LP55 91 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 UQCRHP07919 91 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 CDC25BP30305 580 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 LRMPQ12912 555 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
PIF1-202ENST00000333425 ZSCAN10Q96SZ4 725 aaPredicted RBP23.35■■□□□ 1.33
PIF1-202ENST00000333425 NPHP1O15259 732 aa23.34■■□□□ 1.33
PIF1-202ENST00000333425 TM4SF1P30408 202 aa23.34■■□□□ 1.33
PIF1-202ENST00000333425 RCAN1P53805 252 aa23.34■■□□□ 1.33
PIF1-202ENST00000333425 ENAHQ8N8S7 591 aaPredicted RBP23.34■■□□□ 1.33
PIF1-202ENST00000333425 HPSEQ9Y251 543 aa23.34■■□□□ 1.33
PIF1-202ENST00000333425 USP17L12C9JPN9 530 aa23.34■■□□□ 1.33
PIF1-202ENST00000333425 USP17L21D6R901 530 aa23.34■■□□□ 1.33
PIF1-202ENST00000333425 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.34■■□□□ 1.33
PIF1-202ENST00000333425 AATFQ9NY61 560 aaKnown RBP eCLIP23.34■■□□□ 1.33
PIF1-202ENST00000333425 CCDC144BQ3MJ40 725 aa23.33■■□□□ 1.33
PIF1-202ENST00000333425 TXNRD3Q86VQ6 643 aa23.33■■□□□ 1.33
PIF1-202ENST00000333425 MRFAP1L1Q96HT8 127 aa23.33■■□□□ 1.33
PIF1-202ENST00000333425 TIGD1Q96MW7 591 aa23.33■■□□□ 1.33
PIF1-202ENST00000333425 JAG2Q9Y219 1238 aa23.33■■□□□ 1.33
PIF1-202ENST00000333425 CUTAO60888 179 aa23.33■■□□□ 1.32
PIF1-202ENST00000333425 PRDX5P30044 214 aa23.33■■□□□ 1.32
PIF1-202ENST00000333425 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.32
PIF1-202ENST00000333425 NLRP12P59046 1061 aa23.33■■□□□ 1.32
PIF1-202ENST00000333425 RBM6P78332 1123 aaKnown RBP23.33■■□□□ 1.32
PIF1-202ENST00000333425 EVX2Q03828 476 aa23.32■■□□□ 1.32
PIF1-202ENST00000333425 IFIT1BQ5T764 474 aaKnown RBP23.32■■□□□ 1.32
PIF1-202ENST00000333425 RESP18Q5W5W9 173 aa23.32■■□□□ 1.32
PIF1-202ENST00000333425 FOXP1Q9H334 677 aaPredicted RBP23.32■■□□□ 1.32
PIF1-202ENST00000333425 ISM2Q6H9L7 571 aa23.31■■□□□ 1.32
PIF1-202ENST00000333425 COL24A1Q17RW2 1714 aa23.31■■□□□ 1.32
PIF1-202ENST00000333425 RFC4P35249 363 aa23.31■■□□□ 1.32
PIF1-202ENST00000333425 NR5A1Q13285 461 aa23.31■■□□□ 1.32
PIF1-202ENST00000333425 MYH13Q9UKX3 1938 aa23.31■■□□□ 1.32
PIF1-202ENST00000333425 DUOX1Q9NRD9 1551 aa23.31■■□□□ 1.32
PIF1-202ENST00000333425 IQCA1Q86XH1 822 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 OXER1Q8TDS5 423 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 CACTINQ8WUQ7 758 aaKnown RBP23.3■■□□□ 1.32
PIF1-202ENST00000333425 PDS5AQ29RF7 1337 aaKnown RBP23.3■■□□□ 1.32
PIF1-202ENST00000333425 FAM237AA0A1B0GTK4 181 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 FGRP09769 529 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 AKAP17AQ02040 695 aaKnown RBP23.3■■□□□ 1.32
PIF1-202ENST00000333425 PPP2R5BQ15173 497 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 CATIPQ7Z7H3 387 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 KRI1Q8N9T8 703 aaKnown RBP23.3■■□□□ 1.32
PIF1-202ENST00000333425 BPIFA3Q9BQP9 254 aa23.3■■□□□ 1.32
PIF1-202ENST00000333425 CRNKL1Q9BZJ0 848 aaKnown RBP23.3■■□□□ 1.32
PIF1-202ENST00000333425 SPECC1Q5M775 1068 aa23.29■■□□□ 1.32
PIF1-202ENST00000333425 RNF26Q9BY78 433 aaPredicted RBP23.29■■□□□ 1.32
PIF1-202ENST00000333425 DCP1AQ9NPI6 582 aaPredicted RBP23.29■■□□□ 1.32
PIF1-202ENST00000333425 TRAPPC3LQ5T215 181 aa23.29■■□□□ 1.32
PIF1-202ENST00000333425 hCG_1642624A0A1W2PR95 340 aa23.28■■□□□ 1.32
PIF1-202ENST00000333425 PCP11498 1178 aaKnown RBP23.28■■□□□ 1.32
PIF1-202ENST00000333425 RILPL1Q5EBL4 403 aa23.28■■□□□ 1.32
PIF1-202ENST00000333425 SLC51AQ86UW1 340 aa23.28■■□□□ 1.32
PIF1-202ENST00000333425 KCNH3Q9ULD8 1083 aa23.28■■□□□ 1.32
PIF1-202ENST00000333425 NHSQ6T4R5 1651 aa23.28■■□□□ 1.32
PIF1-202ENST00000333425 MYH6P13533 1939 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms