RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CCDC196A0A1B0GTZ2 297 aa23.62■■□□□ 1.37
LINC01006-201ENST00000333319 GTF2E1P29083 439 aaPredicted RBP23.62■■□□□ 1.37
LINC01006-201ENST00000333319 SMIM5Q71RC9 77 aa23.62■■□□□ 1.37
LINC01006-201ENST00000333319 ZNF654Q8IZM8 581 aa23.62■■□□□ 1.37
LINC01006-201ENST00000333319 CRACR2BQ8N4Y2 399 aaPredicted RBP23.62■■□□□ 1.37
LINC01006-201ENST00000333319 C16orf45Q96MC5 204 aaPredicted RBP23.62■■□□□ 1.37
LINC01006-201ENST00000333319 NEMFO60524 1076 aa23.61■■□□□ 1.37
LINC01006-201ENST00000333319 CUTAO60888 179 aa23.61■■□□□ 1.37
LINC01006-201ENST00000333319 RIOK1Q9BRS2 568 aaKnown RBP23.61■■□□□ 1.37
LINC01006-201ENST00000333319 FAM237AA0A1B0GTK4 181 aa23.61■■□□□ 1.37
LINC01006-201ENST00000333319 DEXIO95424 95 aa23.61■■□□□ 1.37
LINC01006-201ENST00000333319 ESR2Q92731 530 aa23.61■■□□□ 1.37
LINC01006-201ENST00000333319 CELF1Q92879 486 aaKnown RBP23.61■■□□□ 1.37
LINC01006-201ENST00000333319 FAM84BQ96KN1 310 aaPredicted RBP23.61■■□□□ 1.37
LINC01006-201ENST00000333319 ANAPC4Q9UJX5 808 aa23.61■■□□□ 1.37
LINC01006-201ENST00000333319 DYNLL1P63167 89 aaKnown RBP23.6■■□□□ 1.37
LINC01006-201ENST00000333319 FAM98CQ17RN3 349 aaKnown RBP23.6■■□□□ 1.37
LINC01006-201ENST00000333319 TUBE1Q9UJT0 475 aa23.6■■□□□ 1.37
LINC01006-201ENST00000333319 TNKSO95271 1327 aa23.6■■□□□ 1.37
LINC01006-201ENST00000333319 RIOK3O14730 519 aaKnown RBP23.59■■□□□ 1.37
LINC01006-201ENST00000333319 TBC1D9BQ66K14 1250 aa23.59■■□□□ 1.37
LINC01006-201ENST00000333319 MAP7D2Q96T17 732 aa23.59■■□□□ 1.37
LINC01006-201ENST00000333319 TOB1P50616 345 aaPredicted RBP23.59■■□□□ 1.37
LINC01006-201ENST00000333319 RCAN1P53805 252 aa23.59■■□□□ 1.37
LINC01006-201ENST00000333319 PNOCQ13519 176 aa23.59■■□□□ 1.37
LINC01006-201ENST00000333319 A0A1B0GUL6 1792 aa23.59■■□□□ 1.37
LINC01006-201ENST00000333319 SMTNL1A8MU46 457 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 SKILP12757 684 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 TPM4P67936 248 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 NCAPHQ15003 741 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 SEC23AQ15436 765 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 KRI1Q8N9T8 703 aaKnown RBP23.58■■□□□ 1.37
LINC01006-201ENST00000333319 FOXP1Q9H334 677 aaPredicted RBP23.58■■□□□ 1.37
LINC01006-201ENST00000333319 KCNH3Q9ULD8 1083 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
LINC01006-201ENST00000333319 SMC2O95347 1197 aa23.58■■□□□ 1.36
LINC01006-201ENST00000333319 TPD52L1Q16890 204 aaPredicted RBP23.58■■□□□ 1.36
LINC01006-201ENST00000333319 LONRF3Q496Y0 759 aa23.58■■□□□ 1.36
LINC01006-201ENST00000333319 XPO4Q9C0E2 1151 aaKnown RBP23.58■■□□□ 1.36
LINC01006-201ENST00000333319 IFNKQ9P0W0 207 aa23.58■■□□□ 1.36
LINC01006-201ENST00000333319 CYP2D7A0A087X1C5 515 aa23.57■■□□□ 1.36
LINC01006-201ENST00000333319 NR5A1Q13285 461 aa23.57■■□□□ 1.36
LINC01006-201ENST00000333319 SPECC1Q5M775 1068 aa23.57■■□□□ 1.36
LINC01006-201ENST00000333319 TNNT1P13805 278 aa23.57■■□□□ 1.36
LINC01006-201ENST00000333319 ZNF384Q8TF68 577 aa23.57■■□□□ 1.36
LINC01006-201ENST00000333319 CASZ1Q86V15 1759 aa23.57■■□□□ 1.36
LINC01006-201ENST00000333319 BAZ2AQ9UIF9 1905 aaKnown RBP23.56■■□□□ 1.36
LINC01006-201ENST00000333319 CCZ1BP86790 482 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 CCZ1P86791 482 aaPredicted RBP23.56■■□□□ 1.36
LINC01006-201ENST00000333319 RILPL1Q5EBL4 403 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 METTL16Q86W50 562 aaKnown RBP23.56■■□□□ 1.36
LINC01006-201ENST00000333319 CNNM3Q8NE01 707 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 BCL2L12Q9HB09 334 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 MYH2Q9UKX2 1941 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 SLC10A5Q5PT55 438 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 KRBA2Q6ZNG9 492 aa23.56■■□□□ 1.36
LINC01006-201ENST00000333319 ENAHQ8N8S7 591 aaPredicted RBP23.56■■□□□ 1.36
LINC01006-201ENST00000333319 ZSCAN10Q96SZ4 725 aaPredicted RBP23.56■■□□□ 1.36
LINC01006-201ENST00000333319 IKBKBO14920 756 aa23.55■■□□□ 1.36
LINC01006-201ENST00000333319 KLRK1P26718 216 aa23.55■■□□□ 1.36
LINC01006-201ENST00000333319 GSDMDP57764 484 aa23.55■■□□□ 1.36
LINC01006-201ENST00000333319 MTERF4Q7Z6M4 381 aaKnown RBP23.55■■□□□ 1.36
LINC01006-201ENST00000333319 OXER1Q8TDS5 423 aa23.55■■□□□ 1.36
LINC01006-201ENST00000333319 BRIP1Q9BX63 1249 aa23.55■■□□□ 1.36
LINC01006-201ENST00000333319 PRDM1O75626 825 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 LMOD1P29536 600 aaPredicted RBP23.54■■□□□ 1.36
LINC01006-201ENST00000333319 PTF1AQ7RTS3 328 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 FBXO33Q7Z6M2 555 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 OSBPL5Q9H0X9 879 aaPredicted RBP23.54■■□□□ 1.36
LINC01006-201ENST00000333319 IMPACTQ9P2X3 320 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 PCDHB6Q9Y5E3 794 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 CNTNAP4Q9C0A0 1308 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 RPS8P62241 208 aaKnown RBP23.54■■□□□ 1.36
LINC01006-201ENST00000333319 GRIN1Q05586 938 aa23.54■■□□□ 1.36
LINC01006-201ENST00000333319 RNF26Q9BY78 433 aaPredicted RBP23.54■■□□□ 1.36
LINC01006-201ENST00000333319 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 AKAP17AQ02040 695 aaKnown RBP23.53■■□□□ 1.36
LINC01006-201ENST00000333319 PPP2R5BQ15173 497 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 FOXP4Q8IVH2 680 aaPredicted RBP23.53■■□□□ 1.36
LINC01006-201ENST00000333319 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
LINC01006-201ENST00000333319 FBXO2Q9UK22 296 aaPredicted RBP23.53■■□□□ 1.36
LINC01006-201ENST00000333319 MYH6P13533 1939 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 USP27XA6NNY8 438 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 ATP2B1P20020 1258 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 PTPREP23469 700 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 IFIT1BQ5T764 474 aaKnown RBP23.53■■□□□ 1.36
LINC01006-201ENST00000333319 CTR9Q6PD62 1173 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 TMC6Q7Z403 805 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 ZNF710Q8N1W2 664 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 NLRP3Q96P20 1036 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 PCDHA5Q9Y5H7 936 aa23.53■■□□□ 1.36
LINC01006-201ENST00000333319 SCN7AQ01118 1682 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 ZNF831Q5JPB2 1677 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 NSUN4Q96CB9 384 aaKnown RBP23.52■■□□□ 1.36
LINC01006-201ENST00000333319 SETDB2Q96T68 719 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 NYXQ9GZU5 481 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 HSD3B7Q9H2F3 369 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 CABP5Q9NP86 173 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
LINC01006-201ENST00000333319 FOXN1O15353 648 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms