RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CCDC84Q86UT8 332 aaPredicted RBP24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 MAPKAPK5Q8IW41 473 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 MAGEB6Q8N7X4 407 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 ZFYVE28Q9HCC9 887 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 ZHX2Q9Y6X8 837 aa24.18■■□□□ 1.46
PDZRN3-202ENST00000308537 A0A0G2JLL6 359 aaPredicted RBP24.17■■□□□ 1.46
PDZRN3-202ENST00000308537 PRRT2Q7Z6L0 340 aaPredicted RBP24.17■■□□□ 1.46
PDZRN3-202ENST00000308537 EDC3Q96F86 508 aaKnown RBP24.17■■□□□ 1.46
PDZRN3-202ENST00000308537 RIOK1Q9BRS2 568 aaKnown RBP24.17■■□□□ 1.46
PDZRN3-202ENST00000308537 MIGA1Q8NAN2 632 aa24.16■■□□□ 1.46
PDZRN3-202ENST00000308537 ERO1AQ96HE7 468 aa24.16■■□□□ 1.46
PDZRN3-202ENST00000308537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.16■■□□□ 1.46
PDZRN3-202ENST00000308537 TRIM17Q9Y577 477 aa24.16■■□□□ 1.46
PDZRN3-202ENST00000308537 LOC285556D6RIA3 1793 aa24.16■■□□□ 1.46
PDZRN3-202ENST00000308537 JAG1P78504 1218 aa24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 TMED8Q6PL24 325 aaPredicted RBP24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 C17orf99Q6UX52 265 aa24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 NOL10Q9BSC4 688 aaKnown RBP24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 DHX36Q9H2U1 1008 aaKnown RBP24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 PI4KBQ9UBF8 816 aa24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 HERC5Q9UII4 1024 aaKnown RBP24.15■■□□□ 1.46
PDZRN3-202ENST00000308537 MYH7P12883 1935 aa24.14■■□□□ 1.46
PDZRN3-202ENST00000308537 TCRBV5S4A2TA0A5A2 114 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 PDHXO00330 501 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 IFIT2P09913 472 aaKnown RBP24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 CAP2P40123 477 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 RRP1P56182 461 aaKnown RBP24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 MAP3K12Q12852 859 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 DCTPP1Q9H773 170 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 PICK1Q9NRD5 415 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 PALD1Q9ULE6 856 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 PCDHB15Q9Y5E8 787 aa24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 KIAA0100Q14667 2235 aaKnown RBP24.14■■□□□ 1.45
PDZRN3-202ENST00000308537 SMARCA5O60264 1052 aaPredicted RBP24.13■■□□□ 1.45
PDZRN3-202ENST00000308537 PDE6AP16499 860 aa24.13■■□□□ 1.45
PDZRN3-202ENST00000308537 ATP5JP18859 108 aa24.13■■□□□ 1.45
PDZRN3-202ENST00000308537 PTPN22Q9Y2R2 807 aa24.13■■□□□ 1.45
PDZRN3-202ENST00000308537 TNRC18O15417 2968 aaPredicted RBP24.13■■□□□ 1.45
PDZRN3-202ENST00000308537 GOLIM4O00461 696 aa24.12■■□□□ 1.45
PDZRN3-202ENST00000308537 CTGFP29279 349 aa24.12■■□□□ 1.45
PDZRN3-202ENST00000308537 SHROOM1Q2M3G4 852 aaPredicted RBP24.12■■□□□ 1.45
PDZRN3-202ENST00000308537 LRRCC1Q9C099 1032 aa24.12■■□□□ 1.45
PDZRN3-202ENST00000308537 ARHGAP39Q9C0H5 1083 aa24.12■■□□□ 1.45
PDZRN3-202ENST00000308537 NAV1Q8NEY1 1877 aa24.12■■□□□ 1.45
PDZRN3-202ENST00000308537 TTF1Q15361 905 aaPredicted RBP24.11■■□□□ 1.45
PDZRN3-202ENST00000308537 DNAJC2Q99543 621 aaKnown RBP24.11■■□□□ 1.45
PDZRN3-202ENST00000308537 EFCC1Q9HA90 598 aa24.11■■□□□ 1.45
PDZRN3-202ENST00000308537 CHGBP05060 677 aa24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 SOX10P56693 466 aa24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 LACTBP83111 547 aaPredicted RBP24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 FOXP4Q8IVH2 680 aaPredicted RBP24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 HAUS7Q99871 368 aa24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 BOLA2Q9H3K6 86 aa24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 SAP30BPQ9UHR5 308 aaKnown RBP24.1■■□□□ 1.45
PDZRN3-202ENST00000308537 TRIM75PA6NK02 468 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 CYP2C8P10632 490 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 BCRP11274 1271 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 SLFNL1Q499Z3 407 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 SLC9C2Q5TAH2 1124 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 CERS3Q8IU89 383 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 CPA4Q9UI42 421 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 MGAMO43451 1857 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 ZNF532Q9HCE3 1301 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 PDE4DIPQ5VU43 2346 aa24.09■■□□□ 1.45
PDZRN3-202ENST00000308537 PAG1Q9NWQ8 432 aa24.08■■□□□ 1.45
PDZRN3-202ENST00000308537 SLC45A1Q9Y2W3 748 aa24.08■■□□□ 1.45
PDZRN3-202ENST00000308537 RBBP6Q7Z6E9 1792 aaKnown RBP24.08■■□□□ 1.44
PDZRN3-202ENST00000308537 EVX2Q03828 476 aa24.07■■□□□ 1.44
PDZRN3-202ENST00000308537 SPP2Q13103 211 aa24.07■■□□□ 1.44
PDZRN3-202ENST00000308537 SLC4A8Q2Y0W8 1093 aa24.07■■□□□ 1.44
PDZRN3-202ENST00000308537 TREML2Q5T2D2 321 aa24.07■■□□□ 1.44
PDZRN3-202ENST00000308537 FASTKD5Q7L8L6 764 aaKnown RBP24.07■■□□□ 1.44
PDZRN3-202ENST00000308537 BCL11AQ9H165 835 aa24.07■■□□□ 1.44
PDZRN3-202ENST00000308537 MKI67P46013 3256 aaKnown RBP24.06■■□□□ 1.44
PDZRN3-202ENST00000308537 ADD2P35612 726 aa24.06■■□□□ 1.44
PDZRN3-202ENST00000308537 SH3D19Q5HYK7 790 aa24.06■■□□□ 1.44
PDZRN3-202ENST00000308537 ZNF280CQ8ND82 737 aa24.06■■□□□ 1.44
PDZRN3-202ENST00000308537 EHD4Q9H223 541 aa24.06■■□□□ 1.44
PDZRN3-202ENST00000308537 DOCK3Q8IZD9 2030 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 MAGEB6P1A0A0J9YX57 407 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 USP17L5A8MUK1 530 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 TATDN1Q6P1N9 297 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 GADL1Q6ZQY3 521 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 LCORLQ8N3X6 602 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 ARMC5Q96C12 935 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 PARK7Q99497 189 aaKnown RBP24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 WDR18Q9BV38 432 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 AGTPBP1Q9UPW5 1226 aa24.05■■□□□ 1.44
PDZRN3-202ENST00000308537 BAZ2AQ9UIF9 1905 aaKnown RBP24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 USP5P45974 858 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 PLCD1P51178 756 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 GABPAQ06546 454 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 PROCA1Q8NCQ7 364 aaPredicted RBP24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 TRIM47Q96LD4 638 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 CRBNQ96SW2 442 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 TBC1D2Q9BYX2 928 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 ZBTB21Q9ULJ3 1066 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 PTCH2Q9Y6C5 1203 aa24.04■■□□□ 1.44
PDZRN3-202ENST00000308537 GDF11O95390 407 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms