RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 CSF1RP07333 972 aa7.15□□□□□ -1.26
ZNF440-201ENST00000304060 BCRP11274 1271 aa7.15□□□□□ -1.26
ZNF440-201ENST00000304060 XRCC5P13010 732 aaKnown RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 MRPS5P82675 430 aaKnown RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 PPIGQ13427 754 aaKnown RBP eCLIP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 USP17L2Q6R6M4 530 aa7.15□□□□□ -1.26
ZNF440-201ENST00000304060 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
ZNF440-201ENST00000304060 IL16Q14005 1332 aa7.15□□□□□ -1.27
ZNF440-201ENST00000304060 ZEB2O60315 1214 aa7.15□□□□□ -1.27
ZNF440-201ENST00000304060 PDIA4P13667 645 aaKnown RBP7.15□□□□□ -1.27
ZNF440-201ENST00000304060 COL9A1P20849 921 aa7.15□□□□□ -1.27
ZNF440-201ENST00000304060 INPP5BP32019 993 aa7.15□□□□□ -1.27
ZNF440-201ENST00000304060 PICALMQ13492 652 aa7.15□□□□□ -1.27
ZNF440-201ENST00000304060 ATP2B3Q16720 1220 aa7.15□□□□□ -1.27
ZNF440-201ENST00000304060 ANKRD36CQ5JPF3 1778 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 MROH7Q68CQ1 1323 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 COL25A1Q9BXS0 654 aaPredicted RBP7.14□□□□□ -1.27
ZNF440-201ENST00000304060 ARHGAP39Q9C0H5 1083 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 LRP2BPQ9P2M1 347 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 CNPY2Q9Y2B0 182 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 UQCRFS1P1P0C7P4 283 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 CYP2C8P10632 490 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 GJA5P36382 358 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 SPP2Q13103 211 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 BRDTQ58F21 947 aaPredicted RBP7.14□□□□□ -1.27
ZNF440-201ENST00000304060 FAM161BQ96MY7 647 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 MPHOSPH6Q99547 160 aaKnown RBP7.14□□□□□ -1.27
ZNF440-201ENST00000304060 CEP290O15078 2479 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 ACTN1P12814 892 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 IGFBP4P22692 258 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 FOXP4Q8IVH2 680 aaPredicted RBP7.14□□□□□ -1.27
ZNF440-201ENST00000304060 SEZ6LQ9BYH1 1024 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 POLR2AP24928 1970 aaKnown RBP7.14□□□□□ -1.27
ZNF440-201ENST00000304060 KIF16BQ96L93 1317 aa7.14□□□□□ -1.27
ZNF440-201ENST00000304060 A0A0G2JLL6 359 aaPredicted RBP7.13□□□□□ -1.27
ZNF440-201ENST00000304060 SLC15A5A6NIM6 579 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 RGS3P49796 1198 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 PRRT2Q7Z6L0 340 aaPredicted RBP7.13□□□□□ -1.27
ZNF440-201ENST00000304060 TMEM199Q8N511 208 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 ATXN2LQ8WWM7 1075 aaKnown RBP7.13□□□□□ -1.27
ZNF440-201ENST00000304060 FZD1Q9UP38 647 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 RARBP10826 455 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 TTC6Q86TZ1 520 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 DHX37Q8IY37 1157 aaKnown RBP7.13□□□□□ -1.27
ZNF440-201ENST00000304060 NUP133Q8WUM0 1156 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 CRISPLD2Q9H0B8 497 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 PAK6Q9NQU5 681 aaPredicted RBP7.13□□□□□ -1.27
ZNF440-201ENST00000304060 RABGAP1Q9Y3P9 1069 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 RTP1P59025 263 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 KRT24Q2M2I5 525 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 PSRC1Q6PGN9 363 aaPredicted RBP7.13□□□□□ -1.27
ZNF440-201ENST00000304060 LRP10Q7Z4F1 713 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 TEX11Q8IYF3 940 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 PPM1EQ8WY54 764 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 TMEM39AQ9NV64 488 aa7.13□□□□□ -1.27
ZNF440-201ENST00000304060 USP17L10C9JJH3 530 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 PDE8BO95263 885 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 IL15P40933 162 aaPredicted RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 MAP2K5Q13163 448 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 CERS5Q8N5B7 392 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 FAM84BQ96KN1 310 aaPredicted RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 SLC28A3Q9HAS3 691 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 STRNO43815 780 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 ATN1P54259 1190 aaPredicted RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 CACNB3P54284 484 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 CCDC158Q5M9N0 1113 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 PI4KBQ9UBF8 816 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 OGDHLQ9ULD0 1010 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 ISY1Q9ULR0 285 aaKnown RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 B4DLN1 442 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 PTPRAP18433 802 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 MRPL12P52815 198 aaKnown RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 FPGSQ05932 587 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 FBXO33Q7Z6M2 555 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 TXNRD3Q86VQ6 643 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 DDX20Q9UHI6 824 aaKnown RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 DNM1LO00429 736 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 USP5P45974 858 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 PDE4CQ08493 712 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 G3BP1Q13283 466 aaKnown RBP eCLIP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 TMED8Q6PL24 325 aaPredicted RBP7.12□□□□□ -1.27
ZNF440-201ENST00000304060 HOXC10Q9NYD6 342 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 ZNF112Q9UJU3 913 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 PRDM4Q9UKN5 801 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 GABRQQ9UN88 632 aa7.12□□□□□ -1.27
ZNF440-201ENST00000304060 KCTD2Q14681 263 aa7.11□□□□□ -1.27
ZNF440-201ENST00000304060 Q7L0L9 218 aa7.11□□□□□ -1.27
ZNF440-201ENST00000304060 RPUSD2Q8IZ73 545 aaKnown RBP7.11□□□□□ -1.27
ZNF440-201ENST00000304060 MB21D1Q8N884 522 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms