RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.82□□□□□ -1.321e-8■□□□□ 8.2
PATL1-201ENST00000300146 RAET1EQ8TD07 263 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 DDRGK1Q96HY6 314 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 PAG1Q9NWQ8 432 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 SLC4A4Q9Y6R1 1079 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 CA12O43570 354 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 GTF2A2P52657 109 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 POLA2Q14181 598 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 SLC9C1Q4G0N8 1177 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 LCORLQ8N3X6 602 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 ZBED3Q96IU2 234 aaPredicted RBP6.82□□□□□ -1.32
PATL1-201ENST00000300146 WDR90Q96KV7 1748 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 ELNP15502 786 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 PDE6AP16499 860 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 TDO2P48775 406 aa6.82□□□□□ -1.32
PATL1-201ENST00000300146 USP17L12C9JPN9 530 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 USP17L21D6R901 530 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 CETPP11597 493 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 CYP2B6P20813 491 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 PLCD1P51178 756 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 MTX1Q13505 466 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 ANO1Q5XXA6 986 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 CABP5Q9NP86 173 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 LAMB2P55268 1798 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 HAND2P61296 217 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 GPATCH3Q96I76 525 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 TMEM106CQ9BVX2 250 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 OSBPL5Q9H0X9 879 aaPredicted RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 MKNK2Q9HBH9 465 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 FBXO3Q9UK99 471 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 COL1A1P02452 1464 aaPredicted RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 TNPO2O14787 897 aaKnown RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 CNGA1P29973 690 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 RHBDL3P58872 404 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 RRP1BQ14684 758 aaKnown RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 HOOK2Q96ED9 719 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 CRNKL1Q9BZJ0 848 aaKnown RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 TANGO6Q9C0B7 1094 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 CHMP4BQ9H444 224 aaKnown RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 TMOD4Q9NZQ9 345 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 PTPRAP18433 802 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 HDLBPQ00341 1268 aaKnown RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 SEPT2Q15019 361 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 CERKLQ49MI3 558 aaPredicted RBP6.81□□□□□ -1.32
PATL1-201ENST00000300146 TREML2Q5T2D2 321 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 MTMR14Q8NCE2 650 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 ACER1Q8TDN7 264 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 INCENPQ9NQS7 918 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 PI4KBQ9UBF8 816 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 HPS5Q9UPZ3 1129 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 PTCH2Q9Y6C5 1203 aa6.81□□□□□ -1.32
PATL1-201ENST00000300146 HTTP42858 3142 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 GPR75-ASB3A0A0A6YYF3 556 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 SEMA3EO15041 775 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 MLLT1Q03111 559 aaPredicted RBP6.8□□□□□ -1.32
PATL1-201ENST00000300146 OTOP1Q7RTM1 612 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 AMOTL1Q8IY63 956 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 ANKRD36CQ5JPF3 1778 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 EN2P19622 333 aaPredicted RBP6.8□□□□□ -1.32
PATL1-201ENST00000300146 CHMP4BP1P59074 171 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 JAG1P78504 1218 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 MTFR1Q15390 333 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 CPXCR1Q8N123 301 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.8□□□□□ -1.321e-6■■□□□ 13.2
PATL1-201ENST00000300146 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
PATL1-201ENST00000300146 CTDP1Q9Y5B0 961 aaPredicted RBP6.8□□□□□ -1.32
PATL1-201ENST00000300146 DLEC1Q9Y238 1755 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 SCN4AP35499 1836 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 ARID4AP29374 1257 aaPredicted RBP6.8□□□□□ -1.32
PATL1-201ENST00000300146 CAP1Q01518 475 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 SCYL3Q8IZE3 742 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 DPF3Q92784 378 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 RNF208Q9H0X6 261 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 ECHDC1Q9NTX5 307 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 PPP2R3BQ9Y5P8 575 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 FLT1P17948 1338 aa6.8□□□□□ -1.32
PATL1-201ENST00000300146 SPDYE5A6NIY4 337 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 ALDH1A1P00352 501 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 PLCG2P16885 1265 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 PDE3AQ14432 1141 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 MS4A4AQ96JQ5 239 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 SERPINB13Q9UIV8 391 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 LAMA3Q16787 3333 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 POTEFA5A3E0 1075 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 FKBP1AP62942 108 aaKnown RBP6.79□□□□□ -1.32
PATL1-201ENST00000300146 ABCB5Q2M3G0 1257 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 FAM47AQ5JRC9 791 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 HHIPL1Q96JK4 782 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 SUGT1Q9Y2Z0 365 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 DICER1Q9UPY3 1922 aaKnown RBP6.79□□□□□ -1.32
PATL1-201ENST00000300146 KDM4AO75164 1064 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 ZBTB48P10074 688 aaPredicted RBP6.79□□□□□ -1.32
PATL1-201ENST00000300146 TM4SF4P48230 202 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 TTC6Q86TZ1 520 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 ZNF280CQ8ND82 737 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 NUP88Q99567 741 aaPredicted RBP6.79□□□□□ -1.32
PATL1-201ENST00000300146 HOMER2Q9NSB8 354 aa6.79□□□□□ -1.32
PATL1-201ENST00000300146 NOP58Q9Y2X3 529 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms