RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ARMT1Q9H993 441 aa28.95■■■□□ 2.22
ROM1-201ENST00000278833 TACC3Q9Y6A5 838 aa28.95■■■□□ 2.22
ROM1-201ENST00000278833 RIOK3O14730 519 aaKnown RBP28.94■■■□□ 2.22
ROM1-201ENST00000278833 MYO1BO43795 1136 aa28.94■■■□□ 2.22
ROM1-201ENST00000278833 SART3Q15020 963 aaKnown RBP28.94■■■□□ 2.22
ROM1-201ENST00000278833 ANAPC4Q9UJX5 808 aa28.94■■■□□ 2.22
ROM1-201ENST00000278833 KCNJ6P48051 423 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 CCZ1BP86790 482 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 CCZ1P86791 482 aaPredicted RBP28.93■■■□□ 2.22
ROM1-201ENST00000278833 SEC31BQ9NQW1 1179 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 PAXBP1Q9Y5B6 917 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 CACNA1SQ13698 1873 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 SYKP43405 635 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 ZNF710Q8N1W2 664 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 PHKBQ93100 1093 aa28.93■■■□□ 2.22
ROM1-201ENST00000278833 NCAPHQ15003 741 aa28.92■■■□□ 2.22
ROM1-201ENST00000278833 PPP2R5BQ15173 497 aa28.92■■■□□ 2.22
ROM1-201ENST00000278833 SHC4Q6S5L8 630 aa28.92■■■□□ 2.22
ROM1-201ENST00000278833 NBPF11Q86T75 865 aa28.92■■■□□ 2.22
ROM1-201ENST00000278833 LCORLQ8N3X6 602 aa28.92■■■□□ 2.22
ROM1-201ENST00000278833 CTDSPL2Q05D32 466 aa28.91■■■□□ 2.22
ROM1-201ENST00000278833 NOL10Q9BSC4 688 aaKnown RBP28.91■■■□□ 2.22
ROM1-201ENST00000278833 CCDC196A0A1B0GTZ2 297 aa28.91■■■□□ 2.22
ROM1-201ENST00000278833 CLEC4GQ6UXB4 293 aa28.91■■■□□ 2.22
ROM1-201ENST00000278833 LINC00116Q8NCU8 138 aa28.91■■■□□ 2.22
ROM1-201ENST00000278833 CCDC150Q8NCX0 1101 aa28.91■■■□□ 2.22
ROM1-201ENST00000278833 FOXP1Q9H334 677 aaPredicted RBP28.91■■■□□ 2.22
ROM1-201ENST00000278833 ZNF652Q9Y2D9 606 aa28.91■■■□□ 2.22
ROM1-201ENST00000278833 TAF1LQ8IZX4 1826 aa28.9■■■□□ 2.22
ROM1-201ENST00000278833 MMP1P03956 469 aa28.9■■■□□ 2.22
ROM1-201ENST00000278833 RXRAP19793 462 aa28.9■■■□□ 2.22
ROM1-201ENST00000278833 CHRNDQ07001 517 aa28.9■■■□□ 2.22
ROM1-201ENST00000278833 DUOX1Q9NRD9 1551 aa28.9■■■□□ 2.22
ROM1-201ENST00000278833 SLC4A4Q9Y6R1 1079 aa28.9■■■□□ 2.22
ROM1-201ENST00000278833 TDO2P48775 406 aa28.89■■■□□ 2.22
ROM1-201ENST00000278833 GNL2Q13823 731 aaKnown RBP28.89■■■□□ 2.22
ROM1-201ENST00000278833 WTAPQ15007 396 aa28.89■■■□□ 2.22
ROM1-201ENST00000278833 RTN1Q16799 776 aa28.89■■■□□ 2.22
ROM1-201ENST00000278833 NOSTRINQ8IVI9 506 aa28.89■■■□□ 2.22
ROM1-201ENST00000278833 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.22
ROM1-201ENST00000278833 COL4A1P02462 1669 aa28.89■■■□□ 2.22
ROM1-201ENST00000278833 A0A087WWV3 80 aa28.89■■■□□ 2.21
ROM1-201ENST00000278833 TNNT1P13805 278 aa28.89■■■□□ 2.21
ROM1-201ENST00000278833 NYAP1Q6ZVC0 841 aa28.89■■■□□ 2.21
ROM1-201ENST00000278833 TRIM22Q8IYM9 498 aa28.89■■■□□ 2.21
ROM1-201ENST00000278833 ANKRD7Q92527 254 aa28.89■■■□□ 2.21
ROM1-201ENST00000278833 ERCC4Q92889 916 aaPredicted RBP28.89■■■□□ 2.21
ROM1-201ENST00000278833 SLC26A6Q9BXS9 759 aa28.89■■■□□ 2.21
ROM1-201ENST00000278833 ZBTB22O15209 634 aa28.88■■■□□ 2.21
ROM1-201ENST00000278833 DEXIO95424 95 aa28.88■■■□□ 2.21
ROM1-201ENST00000278833 BCAMP50895 628 aa28.88■■■□□ 2.21
ROM1-201ENST00000278833 NIP7Q9Y221 180 aaKnown RBP eCLIP28.88■■■□□ 2.21
ROM1-201ENST00000278833 MAST2Q6P0Q8 1798 aa28.88■■■□□ 2.21
ROM1-201ENST00000278833 PCP11498 1178 aaKnown RBP28.87■■■□□ 2.21
ROM1-201ENST00000278833 MARCKSP29966 332 aaPredicted RBP28.87■■■□□ 2.21
ROM1-201ENST00000278833 SF3B3Q15393 1217 aaKnown RBP28.87■■■□□ 2.21
ROM1-201ENST00000278833 SAFBQ15424 915 aaKnown RBP eCLIP28.87■■■□□ 2.21
ROM1-201ENST00000278833 MYH6P13533 1939 aa28.87■■■□□ 2.21
ROM1-201ENST00000278833 SKILP12757 684 aa28.87■■■□□ 2.21
ROM1-201ENST00000278833 UBE4AQ14139 1066 aa28.87■■■□□ 2.21
ROM1-201ENST00000278833 COL24A1Q17RW2 1714 aa28.86■■■□□ 2.21
ROM1-201ENST00000278833 ERICH2A1L162 156 aa28.86■■■□□ 2.21
ROM1-201ENST00000278833 PRKAB2O43741 272 aa28.86■■■□□ 2.21
ROM1-201ENST00000278833 PPARAQ07869 468 aa28.86■■■□□ 2.21
ROM1-201ENST00000278833 ZNF827Q17R98 1081 aa28.86■■■□□ 2.21
ROM1-201ENST00000278833 RILPL1Q5EBL4 403 aa28.86■■■□□ 2.21
ROM1-201ENST00000278833 KRI1Q8N9T8 703 aaKnown RBP28.86■■■□□ 2.21
ROM1-201ENST00000278833 C16orf45Q96MC5 204 aaPredicted RBP28.86■■■□□ 2.21
ROM1-201ENST00000278833 PDS5AQ29RF7 1337 aaKnown RBP28.86■■■□□ 2.21
ROM1-201ENST00000278833 COL1A1P02452 1464 aaPredicted RBP28.85■■■□□ 2.21
ROM1-201ENST00000278833 KIF2AO00139 706 aaPredicted RBP28.85■■■□□ 2.21
ROM1-201ENST00000278833 TPD52L1Q16890 204 aaPredicted RBP28.85■■■□□ 2.21
ROM1-201ENST00000278833 ZNF579Q8NAF0 562 aaKnown RBP28.85■■■□□ 2.21
ROM1-201ENST00000278833 AKT1S1Q96B36 256 aa28.85■■■□□ 2.21
ROM1-201ENST00000278833 MYL10Q9BUA6 226 aa28.85■■■□□ 2.21
ROM1-201ENST00000278833 LAMB1P07942 1786 aa28.85■■■□□ 2.21
ROM1-201ENST00000278833 CRACR2BQ8N4Y2 399 aaPredicted RBP28.85■■■□□ 2.21
ROM1-201ENST00000278833 INCENPQ9NQS7 918 aa28.85■■■□□ 2.21
ROM1-201ENST00000278833 GNL3LQ9NVN8 582 aaKnown RBP28.85■■■□□ 2.21
ROM1-201ENST00000278833 KIAA1551Q9HCM1 1747 aa28.84■■■□□ 2.21
ROM1-201ENST00000278833 SNAP23O00161 211 aa28.84■■■□□ 2.21
ROM1-201ENST00000278833 SEC23AQ15436 765 aa28.84■■■□□ 2.21
ROM1-201ENST00000278833 SLC15A2Q16348 729 aa28.84■■■□□ 2.21
ROM1-201ENST00000278833 KRBA2Q6ZNG9 492 aa28.84■■■□□ 2.21
ROM1-201ENST00000278833 XPO4Q9C0E2 1151 aaKnown RBP28.84■■■□□ 2.21
ROM1-201ENST00000278833 LRP2BPQ9P2M1 347 aa28.84■■■□□ 2.21
ROM1-201ENST00000278833 TMED8Q6PL24 325 aaPredicted RBP28.83■■■□□ 2.21
ROM1-201ENST00000278833 ZNF654Q8IZM8 581 aa28.83■■■□□ 2.21
ROM1-201ENST00000278833 CCDC94Q9BW85 323 aaPredicted RBP28.83■■■□□ 2.21
ROM1-201ENST00000278833 RNF26Q9BY78 433 aaPredicted RBP28.83■■■□□ 2.21
ROM1-201ENST00000278833 HSD3B7Q9H2F3 369 aa28.83■■■□□ 2.21
ROM1-201ENST00000278833 FGRP09769 529 aa28.83■■■□□ 2.2
ROM1-201ENST00000278833 PTPREP23469 700 aa28.83■■■□□ 2.2
ROM1-201ENST00000278833 HMGB2P26583 209 aaKnown RBP28.83■■■□□ 2.2
ROM1-201ENST00000278833 ARID5BQ14865 1188 aa28.83■■■□□ 2.2
ROM1-201ENST00000278833 FILIP1Q7Z7B0 1213 aa28.83■■■□□ 2.2
ROM1-201ENST00000278833 DIS3L2Q8IYB7 885 aaKnown RBP28.83■■■□□ 2.2
ROM1-201ENST00000278833 CCAR2Q8N163 923 aaKnown RBP28.83■■■□□ 2.2
ROM1-201ENST00000278833 BRIP1Q9BX63 1249 aa28.83■■■□□ 2.2
ROM1-201ENST00000278833 STK32BQ9NY57 414 aa28.83■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms