RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 CCDC117Q8IWD4 279 aaPredicted RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 SRP68Q9UHB9 627 aaKnown RBP11.28□□□□□ -0.6
VIL1-201ENST00000248444 DNM2P50570 870 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 PROSER3Q2NL68 480 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 ZMYM4Q5VZL5 1548 aa11.28□□□□□ -0.6
VIL1-201ENST00000248444 ATP5JP18859 108 aa11.27□□□□□ -0.6
VIL1-201ENST00000248444 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.6
VIL1-201ENST00000248444 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.6
VIL1-201ENST00000248444 ERBB4Q15303 1308 aa11.27□□□□□ -0.6
VIL1-201ENST00000248444 TERF1P54274 439 aa11.27□□□□□ -0.6
VIL1-201ENST00000248444 SNW1Q13573 536 aaKnown RBP11.27□□□□□ -0.6
VIL1-201ENST00000248444 SPECC1Q5M775 1068 aa11.27□□□□□ -0.6
VIL1-201ENST00000248444 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
VIL1-201ENST00000248444 PRAMEF22A3QJZ6 481 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 PDE4DQ08499 809 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 SNX21Q969T3 373 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 MYOM2P54296 1465 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 TRAF5O00463 557 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 ARID4AP29374 1257 aaPredicted RBP11.27□□□□□ -0.61
VIL1-201ENST00000248444 KLHL40Q2TBA0 621 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 KRT25Q7Z3Z0 450 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 MLXIPQ9HAP2 919 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 TRPC3Q13507 836 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 C8orf34Q49A92 452 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 GLG1Q92896 1179 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 CTNND2Q9UQB3 1225 aa11.27□□□□□ -0.61
VIL1-201ENST00000248444 GOLGA6L10A0A0M3HER8 536 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 A0A1B0GVL5 298 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 CALCRLQ16602 461 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 ANKARQ7Z5J8 1434 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 GNG11P61952 73 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
VIL1-201ENST00000248444 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
VIL1-201ENST00000248444 RAD17O75943 681 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 DIS3L2Q8IYB7 885 aaKnown RBP11.26□□□□□ -0.61
VIL1-201ENST00000248444 SNX29Q8TEQ0 813 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 PIGBQ92521 554 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 SEC31BQ9NQW1 1179 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 PREX2Q70Z35 1606 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 ATP7BP35670 1465 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 ERBB3P21860 1342 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 GSTA5Q7RTV2 222 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 IKBKGQ9Y6K9 419 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 SGSM2O43147 1006 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 LPXNO60711 386 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 UVSSAQ2YD98 709 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
VIL1-201ENST00000248444 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 KIF1BO60333 1816 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 E7EWF7 191 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 FLOT1O75955 427 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 ICA1Q05084 483 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 IFNL3Q8IZI9 196 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 PUS3Q9BZE2 481 aaKnown RBP11.26□□□□□ -0.61
VIL1-201ENST00000248444 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
VIL1-201ENST00000248444 BLMP54132 1417 aaPredicted RBP11.25□□□□□ -0.61
VIL1-201ENST00000248444 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ANKRD35Q8N283 1001 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 PRR36Q9H6K5 1346 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 CALUO43852 315 aaPredicted RBP11.25□□□□□ -0.61
VIL1-201ENST00000248444 METTL13Q8N6R0 699 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ZSCAN10Q96SZ4 725 aaPredicted RBP11.25□□□□□ -0.61
VIL1-201ENST00000248444 LRWD1Q9UFC0 647 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 MAP3K4Q9Y6R4 1608 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ERCC6L2Q5T890 1561 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ELP1O95163 1332 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 SLC8A3P57103 927 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 RNF34Q969K3 372 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 TBC1D7Q9P0N9 293 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 PDE6AP16499 860 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 MYCT1Q8N699 235 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 VPS54Q9P1Q0 977 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
VIL1-201ENST00000248444 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 SMCO2A6NFE2 343 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 PLCB3Q01970 1234 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ABCB5Q2M3G0 1257 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
VIL1-201ENST00000248444 DSCC1Q9BVC3 393 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 SELENOOQ9BVL4 669 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 ADGRL3Q9HAR2 1447 aa11.25□□□□□ -0.61
VIL1-201ENST00000248444 RFX1P22670 979 aa11.24□□□□□ -0.61
VIL1-201ENST00000248444 PRPHP41219 470 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms