RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 HS1BP3Q53T59 392 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 RPGRIP1Q96KN7 1286 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 STK38LQ9Y2H1 464 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 CCDC138Q96M89 665 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 CDV3Q9UKY7 258 aaKnown RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 WBP4O75554 376 aaKnown RBP11.4□□□□□ -0.58
SLF2-201ENST00000238961 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
SLF2-201ENST00000238961 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 MCM5P33992 734 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 TCIRG1Q13488 830 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 KRT81Q14533 505 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 PRKG1Q13976 671 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 TYW5A2RUC4 315 aaKnown RBP11.4□□□□□ -0.58
SLF2-201ENST00000238961 GSTA4O15217 222 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 TTC22Q5TAA0 569 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 IPO11Q9UI26 975 aaKnown RBP11.4□□□□□ -0.58
SLF2-201ENST00000238961 YARSP54577 528 aaKnown RBP11.4□□□□□ -0.58
SLF2-201ENST00000238961 B4GALNT4Q76KP1 1039 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 CHST3Q7LGC8 479 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 NUDCD3Q8IVD9 361 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 Q9H521 79 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 VPS37BQ9H9H4 285 aa11.4□□□□□ -0.58
SLF2-201ENST00000238961 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.58
SLF2-201ENST00000238961 KLF18A0A0U1RQI7 1052 aa11.4□□□□□ -0.59
SLF2-201ENST00000238961 BRD3Q15059 726 aa11.4□□□□□ -0.59
SLF2-201ENST00000238961 MCUQ8NE86 351 aa11.4□□□□□ -0.59
SLF2-201ENST00000238961 CDC26Q8NHZ8 85 aa11.4□□□□□ -0.59
SLF2-201ENST00000238961 LZICQ8WZA0 190 aa11.4□□□□□ -0.59
SLF2-201ENST00000238961 ZC3H12CQ9C0D7 883 aaKnown RBP11.4□□□□□ -0.59
SLF2-201ENST00000238961 PEG3Q9GZU2 1588 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 PLEKHH1Q9ULM0 1364 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 SYT1P21579 422 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 NBPF1Q3BBV0 1214 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 MGARPQ8TDB4 240 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 HLA-DPA1P20036 260 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 ARHGDIAP52565 204 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 HSP90AA5PQ58FG0 334 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 SZRD1Q7Z422 152 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 RPAP2Q8IXW5 612 aaPredicted RBP11.39□□□□□ -0.59
SLF2-201ENST00000238961 MOSPD1Q9UJG1 213 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 H0YC42 278 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 STX17P56962 302 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 TRIM60Q495X7 471 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
SLF2-201ENST00000238961 DDX39AO00148 427 aaKnown RBP11.39□□□□□ -0.59
SLF2-201ENST00000238961 TAF7Q15545 349 aaPredicted RBP11.39□□□□□ -0.59
SLF2-201ENST00000238961 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 RSAD2Q8WXG1 361 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 EXOC7Q9UPT5 735 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 DAAM1Q9Y4D1 1078 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 CD109Q6YHK3 1445 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 HEXIM1O94992 359 aaKnown RBP11.39□□□□□ -0.59
SLF2-201ENST00000238961 SCYL2Q6P3W7 929 aa11.39□□□□□ -0.59
SLF2-201ENST00000238961 EFCAB14O75071 495 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 SERPINB6P35237 376 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
SLF2-201ENST00000238961 TACO1Q9BSH4 297 aaKnown RBP11.38□□□□□ -0.59
SLF2-201ENST00000238961 EFCAB5A4FU69 1503 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 KRT2P35908 639 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 LONP1P36776 959 aaKnown RBP11.38□□□□□ -0.59
SLF2-201ENST00000238961 HIF1AQ16665 826 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 TMTC2Q8N394 836 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 ST7Q9NRC1 585 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 FAN1Q9Y2M0 1017 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 ECE1P42892 770 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 C1orf228Q6PIY5 440 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 PAWRQ96IZ0 340 aaKnown RBP11.38□□□□□ -0.59
SLF2-201ENST00000238961 SMYD2Q9NRG4 433 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 SUGT1Q9Y2Z0 365 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 PPFIA4O75335 1185 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 SKOR1P84550 965 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 SKAP1Q86WV1 359 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 IQGAP2Q13576 1575 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 TRAF5O00463 557 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 SKILP12757 684 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 P4HA1P13674 534 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 HELLSQ9NRZ9 838 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 UQCRFS1P1P0C7P4 283 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 FCHSD1Q86WN1 690 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 KRT12Q99456 494 aa11.38□□□□□ -0.59
SLF2-201ENST00000238961 POLR3CQ9BUI4 534 aaPredicted RBP11.38□□□□□ -0.59
SLF2-201ENST00000238961 PDE3AQ14432 1141 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 SH2D4AQ9H788 454 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 SBNO2Q9Y2G9 1366 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 PHBP35232 272 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 ANGPTL8Q6UXH0 198 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 DTHD1Q6ZMT9 781 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.37□□□□□ -0.59
SLF2-201ENST00000238961 KCNH5Q8NCM2 988 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
SLF2-201ENST00000238961 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms