RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Arpp21Q9DCB4 807 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rfwd2Q9R1A8 733 aaKnown RBP13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Lonp1Q8CGK3 949 aaKnown RBP13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 PdiltQ9DAN1 588 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Plcb1Q9Z1B3 1216 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Qtrt2B8ZXI1 415 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ap1b1O35643 943 aaKnown RBP13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Micall1Q8BGT6 870 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 GopcQ8BH60 463 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Eif2aQ8BJW6 581 aaKnown RBP13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cplx3Q8R1B5 158 aa13.89□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Stim2P83093 746 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cct8l1Q80YT3 562 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ppp4r4Q8C0Y0 875 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rsrc1Q9DBU6 334 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Strn3Q9ERG2 796 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Arhgef2Q60875 985 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Krit1Q6S5J6 736 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ssfa2Q922B9 1252 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Wdr7Q920I9 1489 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Parp2O88554 559 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Sh2b1Q91ZM2 756 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Apol11aE9PZG0 334 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rps6kb1Q8BSK8 525 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 XpcP51612 930 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 YwhaeP62259 255 aaKnown RBP13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Drc1Q3USS3 753 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pabpn1lQ5XFR0 273 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ddx31Q6NZQ2 687 aaKnown RBP13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Parp10Q8CIE4 960 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 CpvlQ9D3S9 478 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 CaluO35887 315 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ncf2O70145 525 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pak1O88643 545 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Q3TYL0 343 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cacna2d2Q6PHS9 1154 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Tmtc4Q8BG19 741 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ebag9Q9D0V7 213 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cacna2d3Q9Z1L5 1091 aa13.88□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Bach1P97302 739 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pcdhb22Q91XZ8 794 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Tti2Q8BGV4 512 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 RestQ8VIG1 1082 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 NapgQ9CWZ7 312 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Lonrf3Q9D4H7 753 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Fyb2A2A995 729 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Slc18a1Q8R090 521 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Dbndd1Q9CZ00 160 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Gpbp1Q6NXH3 473 aaKnown RBP13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ankfy1Q810B6 1169 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ccdc28aQ8CEI3 192 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rabep2Q91WG2 554 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 H2-OaQ9QWV1 250 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Trpm2Q91YD4 1506 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Trim21Q62191 470 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Znf518aB2RRF6 1478 aaKnown RBP13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Prkg1P0C605 671 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cage1Q5IR70 849 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Anapc5Q8BTZ4 740 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Atp12aQ9Z1W8 1035 aa13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Lmo7E9PYF4 1699 aaKnown RBP13.87□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Mphosph8Q3TYA6 858 aaKnown RBP13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 PalldQ9ET54 1408 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ccdc157Q5SPX1 718 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Sos2Q02384 1333 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Clasp2Q8BRT1 1286 aaKnown RBP13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Lrriq3Q14DL3 633 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cavin2Q63918 418 aaKnown RBP13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Mtss1lQ6P9S0 715 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Kcnh3Q9WVJ0 1095 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Mcm5P49718 733 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Stx17Q9D0I4 301 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Cd72P21855 354 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Tsta3P23591 321 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Rimbp2Q80U40 1072 aa13.86□□□□□ -0.19
Col6a3-208ENSMUST00000188587 NmiO35309 314 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pik3caP42337 1068 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ccdc174Q3U155 467 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ahcyl2Q68FL4 613 aaKnown RBP13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Kank4Q6P9J5 1016 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ankrd45Q810N6 248 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Vmn1r199Q8R280 367 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Atp6v0a4Q920R6 833 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Armc9Q9D2I5 817 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Dnajb7Q9QYI8 312 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Dzip3Q7TPV2 1204 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Duxf3A0A0N4SV92 674 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 VrtnQ3SYK4 740 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Tor4aQ8BH02 426 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Gm1661E9Q963 441 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Ccdc186Q8C9S4 917 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 RpgrQ9R0X5 1001 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Skint5A7XUY5 1461 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 C1qbpO35658 278 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Prdm1Q60636 856 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Tubb2aQ7TMM9 445 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Pm20d1Q8C165 503 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Tubb2bQ9CWF2 445 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Trove2O08848 538 aa13.85□□□□□ -0.19
Col6a3-208ENSMUST00000188587 Sult6b1P0CC03 303 aa13.85□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms