RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rabgap1A2AWA9 1064 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Map7O88735 730 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Usp25P57080 1055 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Slc30a1Q60738 503 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Il17raQ60943 864 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 KaznQ69ZS8 779 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Nup133Q8R0G9 1155 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Psmd6Q99JI4 389 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Chaf1aQ9QWF0 911 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 JmyQ9QXM1 983 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Plcb1Q9Z1B3 1216 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Adgrb3Q80ZF8 1522 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Myom3A2ABU4 1439 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Nme9A0A1L1SUL6 329 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Ddx23D3Z0M9 819 aaKnown RBP10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Irx2P81066 474 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Caprin2Q05A80 1031 aaKnown RBP10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Fhod1Q6P9Q4 1197 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 HltfQ6PCN7 1003 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 PigsQ6PD26 555 aaKnown RBP10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Gtf2a2Q80ZM7 109 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Micall1Q8BGT6 870 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Q8BP99 230 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Kri1Q8VDQ9 704 aaKnown RBP10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Snapc2Q91XA5 359 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Plod2Q9R0B9 737 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Skint5A7XUY5 1461 aa10.47□□□□□ -0.73
Upf3b-201ENSMUST00000076265 MecomP14404 1042 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 LdhbP16125 334 aaKnown RBP10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Smg7Q5RJH6 1138 aaKnown RBP10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Q6PD19 689 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 ThemisQ8BGW0 636 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Nim1kQ8BHI9 436 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Ppfia2Q8BSS9 1257 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Chst12Q99LL3 419 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Prkrip1Q9CWV6 186 aaKnown RBP10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Cd2apQ9JLQ0 637 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Slc26a4Q9R155 780 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Sept3Q9Z1S5 350 aa10.46□□□□□ -0.73
Upf3b-201ENSMUST00000076265 Zbtb10E9Q8X5 861 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Barx2O08686 283 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Odr4Q4PJX1 447 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Large2Q5XPT3 690 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Cgnl1Q6AW69 1298 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Dennd2cQ6P9P8 914 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Clec4a1Q80UI7 245 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Tex19.1Q99MV2 351 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Eif4enif1Q9EST3 983 aaKnown RBP10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 B4galt4Q9JJ04 344 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 MefvQ9JJ26 767 aa10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 AatfQ9JKX4 526 aaKnown RBP10.46□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Rims2Q9EQZ7 1530 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Farp1F8VPU2 1048 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ccdc191J3QQ27 883 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Fam184bQ0KK56 942 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ccdc114Q3UX62 658 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Hsph1Q61699 858 aaKnown RBP10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gpcpd1Q8C0L9 675 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Wdr60Q8C761 999 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Znf830Q8R1N0 363 aaKnown RBP10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 StrbpQ91WM1 672 aaKnown RBP10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Lzts2Q91YU6 671 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Drc3Q9D5E4 523 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ccdc39Q9D5Y1 937 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Trpm5Q9JJH7 1158 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Mia2Q91ZV0 1396 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Dmrtb1A2A9I7 359 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Art2aP17981 287 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Akr1b7P21300 316 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Tspyl3Q3UYP3 334 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Trit1Q80UN9 467 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Cox10Q8CFY5 443 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Spag16Q8K450 639 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Eva1aQ91WM6 156 aa10.45□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Brpf3B2KF05 1204 aaKnown RBP10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Akr1b10G5E895 316 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Uhmk1P97343 419 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Smad5P97454 465 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Bbs9Q811G0 885 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Sephs1Q8BH69 392 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Pcdhb20Q91XZ9 799 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Pdia6Q922R8 440 aaKnown RBP10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ints11Q9CWS4 600 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Ttll6A4Q9E8 822 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Gm8879F6R3J9 157 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Eif4a2P10630 407 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 4930480E11RikQ0VG34 394 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 SvipQ3UZP4 77 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Rpa1Q8VEE4 623 aaKnown RBP10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 MpstQ99J99 297 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 1700016D06RikQ9DAA5 166 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 IydQ9DCX8 285 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 WtapQ9ER69 396 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Uts2Q9QZQ3 123 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Kdm5aQ3UXZ9 1690 aa10.44□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Nsd2Q8BVE8 1365 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Cd109Q8R422 1442 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Aldh3a2P47740 484 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Trak1Q6PD31 939 aa10.43□□□□□ -0.74
Upf3b-201ENSMUST00000076265 Atp2b4Q6Q477 1205 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms