RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Csrnp2Q8BGQ2 534 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Arl8aQ8VEH3 186 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ndufb9Q9CQJ8 179 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Bcl2l12Q9D3J3 255 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Gja10Q9WUS4 505 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Letm1Q9Z2I0 738 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Qtrt2B8ZXI1 415 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ampd3O08739 766 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Surf1P09925 306 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Eif5P59325 429 aaKnown RBP18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Rnf41Q8BH75 317 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Nup133Q8R0G9 1155 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Gpr108Q91WD0 569 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Tab2Q99K90 693 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Hip1rQ9JKY5 1068 aa18.36■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ktn1Q61595 1327 aaKnown RBP18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Izumo3A6PWV3 263 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ehmt1Q5DW34 1296 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Stx8O88983 236 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Gnat2P50149 354 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 1700013D24RikQ0P521 120 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Washc1Q8VDD8 475 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Lgr5Q9Z1P4 907 aa18.35■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Tpm3-rs7D3Z2H9 248 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Wnt7aP24383 349 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Kmt5bQ3U8K7 883 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Nom1Q3UFM5 854 aaKnown RBP18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ell2Q3UKU1 639 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Olfr118Q7TRJ6 321 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Usp50Q6P8X6 390 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ybx3Q9JKB3 361 aaKnown RBP18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Rsph10bE9PYQ0 876 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Ckap2Q3V1H1 664 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Panx2Q6IMP4 677 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Triml1Q8BVP1 470 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Nod2Q8K3Z0 1020 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Filip1Q9CS72 1211 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Abcb6Q9DC29 842 aa18.34■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Sipa1l3G3X9J0 1776 aa18.33■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Cyp2j7A0A140T8U1 504 aa18.33■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Sun3Q5SS91 320 aa18.33■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Necab1Q8BG18 352 aa18.33■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Srp68Q8BMA6 625 aaKnown RBP18.33■□□□□ 0.53
Ckap4-201ENSMUST00000053871 Paf1Q8K2T8 535 aa18.33■□□□□ 0.53
Ckap4-201ENSMUST00000053871 GmnnO88513 206 aa18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Trim25Q61510 634 aaKnown RBP18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Gimap8Q75N62 688 aa18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Pus7lQ8CE46 702 aa18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 CenpqQ9CPQ5 267 aa18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Chaf1aQ9QWF0 911 aa18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tulp1Q9Z273 543 aa18.33■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Ankrd63A2ARS0 390 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Atp1b3P97370 278 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Snai1Q02085 264 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Gjb4Q02738 266 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Smc2Q8CG48 1191 aaKnown RBP18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tspyl4Q8VD63 406 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Krt23Q99PS0 422 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Fbxo3Q9DC63 480 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Foxo3Q9WVH4 672 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Arap2Q8BZ05 1703 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Usp53P15975 1069 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Cdc37Q61081 379 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Dpf2Q61103 391 aaKnown RBP18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tmx1Q8VBT0 278 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Apobec3Q99J72 440 aaKnown RBP18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Lrp6O88572 1613 aa18.32■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Ube4aE9Q735 1028 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tuft1O08970 390 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 PparaP23204 468 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Vps18Q8R307 973 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Dctpp1Q9QY93 170 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Pla2g4bP0C871 782 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 VmacQ8BP01 174 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tmem87aQ8BXN9 555 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Ttc14Q9CSP9 761 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Ankrd31A0A140LI88 1765 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Il7P10168 154 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tnnt2P50752 301 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Tpm1P58771 284 aa18.31■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Gm21969J3QJZ1 289 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Cep85Q8BMK0 761 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Ankk1Q8BZ25 745 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Stn1Q8K2X3 378 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Desi2Q9D291 194 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Igsf9bE9PZ19 1328 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Znfx1Q8R151 1909 aaKnown RBP18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Greb1lB9EJV3 1913 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Ovgp1Q62010 721 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Lrrd1Q8C0R9 853 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Mtmr6Q8VE11 617 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Cbx6Q9DBY5 414 aa18.3■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Jakmip2D3YXK0 820 aa18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Bap1Q99PU7 728 aa18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Dync1i1O88485 628 aa18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 NefhP19246 1090 aa18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 SsbP32067 415 aaKnown RBP18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 LtbrP50284 415 aa18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Sec23aQ01405 765 aa18.29■□□□□ 0.52
Ckap4-201ENSMUST00000053871 Bag1Q60739 355 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms