RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 R4GN34 69 aa2.01□□□□□ -2.09
CASC19-278ENST00000642088 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
CASC19-278ENST00000642088 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
CASC19-278ENST00000642088 HERC1Q15751 4861 aa1.98□□□□□ -2.09
CASC19-278ENST00000642088 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
CASC19-278ENST00000642088 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
CASC19-278ENST00000642088 FAT4Q6V0I7 4981 aa1.94□□□□□ -2.1
CASC19-278ENST00000642088 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
CASC19-278ENST00000642088 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
CASC19-278ENST00000642088 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
CASC19-278ENST00000642088 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
CASC19-278ENST00000642088 M0R2T5 61 aa1.91□□□□□ -2.1
CASC19-278ENST00000642088 KRTAP10-10P60014 251 aa1.9□□□□□ -2.1
CASC19-278ENST00000642088 HMCN2Q8NDA2 5059 aa1.9□□□□□ -2.11
CASC19-278ENST00000642088 INE1O15225 51 aa1.89□□□□□ -2.11
CASC19-278ENST00000642088 PP632Q6XCG6 107 aa1.89□□□□□ -2.11
CASC19-278ENST00000642088 MT1HP80294 61 aa1.89□□□□□ -2.11
CASC19-278ENST00000642088 UBR4Q5T4S7 5183 aa1.89□□□□□ -2.11
CASC19-278ENST00000642088 SPRR2GQ9BYE4 73 aa1.87□□□□□ -2.11
CASC19-278ENST00000642088 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
CASC19-278ENST00000642088 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
CASC19-278ENST00000642088 MT2AP02795 61 aa1.83□□□□□ -2.12
CASC19-278ENST00000642088 TNP1P09430 55 aa1.83□□□□□ -2.12
CASC19-278ENST00000642088 MT1FP04733 61 aa1.81□□□□□ -2.12
CASC19-278ENST00000642088 KRTAP19-8Q3LI54 63 aa1.81□□□□□ -2.12
CASC19-278ENST00000642088 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CASC19-278ENST00000642088 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CASC19-278ENST00000642088 MT1BP07438 61 aa1.75□□□□□ -2.13
CASC19-278ENST00000642088 USH2AO75445 5202 aa1.71□□□□□ -2.14
CASC19-278ENST00000642088 MT1XP80297 61 aa1.71□□□□□ -2.14
CASC19-278ENST00000642088 KMT2DO14686 5537 aa1.68□□□□□ -2.14
CASC19-278ENST00000642088 KRTAP8-1Q8IUC2 63 aa1.68□□□□□ -2.14
CASC19-278ENST00000642088 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
CASC19-278ENST00000642088 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
CASC19-278ENST00000642088 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
CASC19-278ENST00000642088 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
CASC19-278ENST00000642088 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.16
CASC19-278ENST00000642088 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
CASC19-278ENST00000642088 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
CASC19-278ENST00000642088 SSPOA2VEC9 5147 aa1.54□□□□□ -2.16
CASC19-278ENST00000642088 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
CASC19-278ENST00000642088 KRTAP19-7Q3SYF9 63 aa1.52□□□□□ -2.17
CASC19-278ENST00000642088 MT1EP04732 61 aa1.5□□□□□ -2.17
CASC19-278ENST00000642088 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
CASC19-278ENST00000642088 MT1LQ93083 61 aa1.48□□□□□ -2.17
CASC19-278ENST00000642088 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
CASC19-278ENST00000642088 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
CASC19-278ENST00000642088 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
CASC19-278ENST00000642088 MUC12Q9UKN1 5478 aa1.47□□□□□ -2.17
CASC19-278ENST00000642088 NEBP20929 6669 aa1.45□□□□□ -2.18
CASC19-278ENST00000642088 MT1GP13640 62 aa1.45□□□□□ -2.18
CASC19-278ENST00000642088 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
CASC19-278ENST00000642088 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
CASC19-278ENST00000642088 MT1MQ8N339 61 aa1.41□□□□□ -2.18
CASC19-278ENST00000642088 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
CASC19-278ENST00000642088 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
CASC19-278ENST00000642088 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.18
CASC19-278ENST00000642088 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
CASC19-278ENST00000642088 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
CASC19-278ENST00000642088 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
CASC19-278ENST00000642088 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
CASC19-278ENST00000642088 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
CASC19-278ENST00000642088 SPRR2EP22531 72 aa1.33□□□□□ -2.2
CASC19-278ENST00000642088 SPRR2BP35325 72 aa1.33□□□□□ -2.2
CASC19-278ENST00000642088 SPRR2AP35326 72 aa1.33□□□□□ -2.2
CASC19-278ENST00000642088 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
CASC19-278ENST00000642088 MT1AP04731 61 aa1.28□□□□□ -2.2
CASC19-278ENST00000642088 SPRR2DP22532 72 aa1.28□□□□□ -2.2
CASC19-278ENST00000642088 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
CASC19-278ENST00000642088 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
CASC19-278ENST00000642088 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
CASC19-278ENST00000642088 PRM1P04553 51 aa1.13□□□□□ -2.23
CASC19-278ENST00000642088 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
CASC19-278ENST00000642088 MT4P47944 62 aa1.08□□□□□ -2.24
CASC19-278ENST00000642088 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
CASC19-278ENST00000642088 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
CASC19-278ENST00000642088 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
CASC19-278ENST00000642088 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 146.7 ms