RNA–Protein interactions for RNA: ENST00000641305.1

PNPO-210, Transcript of pyridoxamine 5'-phosphate oxidase, human

Gene PNPO, Length 3,315 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPO-210	ENST00000641305	SYNE2	Q8WXH0	6885 aa	Known RBP	4.29	□□□□□ -1.72
PNPO-210	ENST00000641305	MT1E	P04732	61 aa		4.29	□□□□□ -1.72
PNPO-210	ENST00000641305	KRTAP4-3	Q9BYR4	195 aa		4.28	□□□□□ -1.72
PNPO-210	ENST00000641305	MT1L	Q93083	61 aa		4.26	□□□□□ -1.73
PNPO-210	ENST00000641305	CRCT1	Q9UGL9	99 aa		4.23	□□□□□ -1.73
PNPO-210	ENST00000641305	KRTAP2-3	P0C7H8	128 aa		4.23	□□□□□ -1.73
PNPO-210	ENST00000641305	KRTAP2-4	Q9BYR9	128 aa		4.23	□□□□□ -1.73
PNPO-210	ENST00000641305	KRTAP2-1	Q9BYU5	128 aa		4.23	□□□□□ -1.73
PNPO-210	ENST00000641305	KRTAP2-2	Q9BYT5	123 aa		4.21	□□□□□ -1.73
PNPO-210	ENST00000641305	LOC100996750	A0A140TA64	210 aa		4.2	□□□□□ -1.74
PNPO-210	ENST00000641305	MDN1	Q9NU22	5596 aa		4.16	□□□□□ -1.74
PNPO-210	ENST00000641305	SPRR2F	Q96RM1	72 aa		4.15	□□□□□ -1.74
PNPO-210	ENST00000641305	KRTAP9-2	Q9BYQ4	174 aa		4.14	□□□□□ -1.75
PNPO-210	ENST00000641305	SYNE1	Q8NF91	8797 aa	Known RBP	4.13	□□□□□ -1.75
PNPO-210	ENST00000641305	MT1G	P13640	62 aa		4.12	□□□□□ -1.75
PNPO-210	ENST00000641305	LCE1A	Q5T7P2	110 aa		4.1	□□□□□ -1.75
PNPO-210	ENST00000641305	KRTAP12-4	P60329	112 aa		4.1	□□□□□ -1.75
PNPO-210	ENST00000641305	KRTAP6-3	Q3LI67	103 aa		4.06	□□□□□ -1.76
PNPO-210	ENST00000641305	KRTAP19-3	Q7Z4W3	81 aa		4.04	□□□□□ -1.76
PNPO-210	ENST00000641305	MT1M	Q8N339	61 aa		4.03	□□□□□ -1.76
PNPO-210	ENST00000641305	OBSCN	Q5VST9	7968 aa		4	□□□□□ -1.77
PNPO-210	ENST00000641305	LCE1E	Q5T753	118 aa		3.98	□□□□□ -1.77
PNPO-210	ENST00000641305	KRTAP9-6	A0A140TA67	174 aa		3.92	□□□□□ -1.78
PNPO-210	ENST00000641305	LCE5A	Q5TCM9	118 aa		3.89	□□□□□ -1.79
PNPO-210	ENST00000641305	KRTAP19-4	Q3LI73	84 aa		3.8	□□□□□ -1.8
PNPO-210	ENST00000641305	LCE1D	Q5T752	114 aa		3.8	□□□□□ -1.8
PNPO-210	ENST00000641305	SPRR2E	P22531	72 aa		3.8	□□□□□ -1.8
PNPO-210	ENST00000641305	SPRR2B	P35325	72 aa		3.8	□□□□□ -1.8
PNPO-210	ENST00000641305	SPRR2A	P35326	72 aa		3.8	□□□□□ -1.8
PNPO-210	ENST00000641305	LCE3B	Q5TA77	95 aa		3.79	□□□□□ -1.8
PNPO-210	ENST00000641305	KRTAP4-9	Q9BYQ8	210 aa		3.76	□□□□□ -1.81
PNPO-210	ENST00000641305	PRM1	P04553	51 aa		3.74	□□□□□ -1.81
PNPO-210	ENST00000641305	KRTAP6-1	Q3LI64	71 aa		3.69	□□□□□ -1.82
PNPO-210	ENST00000641305	KRTAP9-7	A8MTY7	169 aa		3.67	□□□□□ -1.82
PNPO-210	ENST00000641305	KRTAP5-9	P26371	169 aa		3.67	□□□□□ -1.82
PNPO-210	ENST00000641305	LCE1F	Q5T754	118 aa		3.65	□□□□□ -1.83
PNPO-210	ENST00000641305	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.63	□□□□□ -1.83
PNPO-210	ENST00000641305	SPRR2D	P22532	72 aa		3.62	□□□□□ -1.83
PNPO-210	ENST00000641305	MT1A	P04731	61 aa		3.52	□□□□□ -1.85
PNPO-210	ENST00000641305	MUC19	Q7Z5P9	8384 aa		3.49	□□□□□ -1.85
PNPO-210	ENST00000641305	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.49	□□□□□ -1.85
PNPO-210	ENST00000641305	KRTAP4-6	Q9BYQ5	205 aa		3.42	□□□□□ -1.86
PNPO-210	ENST00000641305	NEB	P20929	6669 aa		3.41	□□□□□ -1.86
PNPO-210	ENST00000641305	LCE3E	Q5T5B0	92 aa		3.41	□□□□□ -1.86
PNPO-210	ENST00000641305	LCE3D	Q9BYE3	92 aa		3.39	□□□□□ -1.87
PNPO-210	ENST00000641305	KRTAP6-2	Q3LI66	62 aa		3.36	□□□□□ -1.87
PNPO-210	ENST00000641305	KRTAP9-4	Q9BYQ2	154 aa		3.34	□□□□□ -1.87
PNPO-210	ENST00000641305	MT4	P47944	62 aa		3.33	□□□□□ -1.88
PNPO-210	ENST00000641305	MT3	P25713	68 aa		3.2	□□□□□ -1.9
PNPO-210	ENST00000641305	HMCN1	Q96RW7	5635 aa		3.18	□□□□□ -1.9
PNPO-210	ENST00000641305	LCE4A	Q5TA78	99 aa		3.17	□□□□□ -1.9
PNPO-210	ENST00000641305	KRTAP9-9	Q9BYP9	154 aa		3.14	□□□□□ -1.91
PNPO-210	ENST00000641305	KRTAP5-4	Q6L8H1	288 aa		3.1	□□□□□ -1.91
PNPO-210	ENST00000641305	KRTAP20-1	Q3LI63	56 aa		3.04	□□□□□ -1.92
PNPO-210	ENST00000641305	KRTAP20-2	Q3LI61	65 aa		3.04	□□□□□ -1.92
PNPO-210	ENST00000641305	KRTAP5-2	Q701N4	177 aa		2.85	□□□□□ -1.95
PNPO-210	ENST00000641305	KRTAP4-12	Q9BQ66	201 aa		2.84	□□□□□ -1.95
PNPO-210	ENST00000641305	LCE1B	Q5T7P3	118 aa		2.84	□□□□□ -1.96
PNPO-210	ENST00000641305	KRTAP5-3	Q6L8H2	238 aa		2.84	□□□□□ -1.96
PNPO-210	ENST00000641305	MUC5AC	P98088	5654 aa		2.83	□□□□□ -1.96
PNPO-210	ENST00000641305	KRTAP4-11	Q9BYQ6	195 aa		2.76	□□□□□ -1.97
PNPO-210	ENST00000641305	KRTAP4-2	Q9BYR5	136 aa		2.7	□□□□□ -1.98
PNPO-210	ENST00000641305	LCE1C	Q5T751	118 aa		2.62	□□□□□ -1.99
PNPO-210	ENST00000641305	AHNAK2	Q8IVF2	5795 aa		2.6	□□□□□ -1.99
PNPO-210	ENST00000641305	KRTAP5-1	Q6L8H4	278 aa		2.53	□□□□□ -2
PNPO-210	ENST00000641305	GPR98	Q8WXG9	6306 aa		2.51	□□□□□ -2.01
PNPO-210	ENST00000641305	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.51	□□□□□ -2.01
PNPO-210	ENST00000641305	KRTAP5-10	Q6L8G5	202 aa		2.44	□□□□□ -2.02
PNPO-210	ENST00000641305	KRTAP5-8	O75690	187 aa		2.44	□□□□□ -2.02
PNPO-210	ENST00000641305	KRTAP4-4	Q9BYR3	166 aa		2.39	□□□□□ -2.03
PNPO-210	ENST00000641305	KRTAP21-1	Q3LI58	79 aa		2.37	□□□□□ -2.03
PNPO-210	ENST00000641305	KRTAP21-2	Q3LI59	83 aa		2.32	□□□□□ -2.04
PNPO-210	ENST00000641305	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.19	□□□□□ -2.06
PNPO-210	ENST00000641305	KRTAP5-7	Q6L8G8	165 aa		2.18	□□□□□ -2.06
PNPO-210	ENST00000641305	KRTAP5-11	Q6L8G4	156 aa		2.08	□□□□□ -2.08
PNPO-210	ENST00000641305	AHNAK	Q09666	5890 aa	Known RBP	1.95	□□□□□ -2.1
PNPO-210	ENST00000641305	PHGR1	C9JFL3	82 aa		1.84	□□□□□ -2.12
PNPO-210	ENST00000641305	MUC16	Q8WXI7	14507 aa		1.21	□□□□□ -2.22

Retrieved 78 of 20,778 RNA–protein pairs in 144 ms