RNA–Protein interactions for RNA: ENST00000640605.1

KCNMA1-285, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-285ENST00000640605 MT1GP13640 62 aa4.44□□□□□ -1.7
KCNMA1-285ENST00000640605 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
KCNMA1-285ENST00000640605 LCE2AQ5TA79 106 aaPredicted RBP4.34□□□□□ -1.71
KCNMA1-285ENST00000640605 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.72
KCNMA1-285ENST00000640605 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
KCNMA1-285ENST00000640605 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
KCNMA1-285ENST00000640605 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
KCNMA1-285ENST00000640605 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
KCNMA1-285ENST00000640605 MT1LQ93083 61 aa4.27□□□□□ -1.73
KCNMA1-285ENST00000640605 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
KCNMA1-285ENST00000640605 MT1EP04732 61 aa4.25□□□□□ -1.73
KCNMA1-285ENST00000640605 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
KCNMA1-285ENST00000640605 KRTAP9-6A0A140TA67 174 aa4.17□□□□□ -1.74
KCNMA1-285ENST00000640605 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
KCNMA1-285ENST00000640605 SPRR2EP22531 72 aa4.14□□□□□ -1.75
KCNMA1-285ENST00000640605 SPRR2BP35325 72 aa4.14□□□□□ -1.75
KCNMA1-285ENST00000640605 SPRR2AP35326 72 aa4.14□□□□□ -1.75
KCNMA1-285ENST00000640605 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
KCNMA1-285ENST00000640605 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
KCNMA1-285ENST00000640605 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
KCNMA1-285ENST00000640605 MT1MQ8N339 61 aa4.06□□□□□ -1.76
KCNMA1-285ENST00000640605 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
KCNMA1-285ENST00000640605 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
KCNMA1-285ENST00000640605 SPRR2DP22532 72 aa3.95□□□□□ -1.78
KCNMA1-285ENST00000640605 PRM1P04553 51 aa3.89□□□□□ -1.79
KCNMA1-285ENST00000640605 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
KCNMA1-285ENST00000640605 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
KCNMA1-285ENST00000640605 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
KCNMA1-285ENST00000640605 MT1AP04731 61 aa3.81□□□□□ -1.8
KCNMA1-285ENST00000640605 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
KCNMA1-285ENST00000640605 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
KCNMA1-285ENST00000640605 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
KCNMA1-285ENST00000640605 MT4P47944 62 aa3.71□□□□□ -1.82
KCNMA1-285ENST00000640605 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
KCNMA1-285ENST00000640605 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
KCNMA1-285ENST00000640605 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
KCNMA1-285ENST00000640605 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
KCNMA1-285ENST00000640605 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.83
KCNMA1-285ENST00000640605 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
KCNMA1-285ENST00000640605 MT3P25713 68 aa3.54□□□□□ -1.84
KCNMA1-285ENST00000640605 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
KCNMA1-285ENST00000640605 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
KCNMA1-285ENST00000640605 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
KCNMA1-285ENST00000640605 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
KCNMA1-285ENST00000640605 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
KCNMA1-285ENST00000640605 NEBP20929 6669 aa3.35□□□□□ -1.87
KCNMA1-285ENST00000640605 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
KCNMA1-285ENST00000640605 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
KCNMA1-285ENST00000640605 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.89
KCNMA1-285ENST00000640605 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
KCNMA1-285ENST00000640605 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
KCNMA1-285ENST00000640605 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
KCNMA1-285ENST00000640605 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
KCNMA1-285ENST00000640605 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
KCNMA1-285ENST00000640605 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
KCNMA1-285ENST00000640605 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
KCNMA1-285ENST00000640605 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
KCNMA1-285ENST00000640605 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.97
KCNMA1-285ENST00000640605 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
KCNMA1-285ENST00000640605 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
KCNMA1-285ENST00000640605 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
KCNMA1-285ENST00000640605 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
KCNMA1-285ENST00000640605 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
KCNMA1-285ENST00000640605 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
KCNMA1-285ENST00000640605 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
KCNMA1-285ENST00000640605 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
KCNMA1-285ENST00000640605 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
KCNMA1-285ENST00000640605 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
KCNMA1-285ENST00000640605 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
KCNMA1-285ENST00000640605 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
KCNMA1-285ENST00000640605 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
KCNMA1-285ENST00000640605 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
KCNMA1-285ENST00000640605 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
KCNMA1-285ENST00000640605 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
KCNMA1-285ENST00000640605 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
KCNMA1-285ENST00000640605 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
KCNMA1-285ENST00000640605 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 82.2 ms