RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
SPIN3-242ENST00000640577 MT1LQ93083 61 aa5.42□□□□□ -1.54
SPIN3-242ENST00000640577 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
SPIN3-242ENST00000640577 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
SPIN3-242ENST00000640577 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
SPIN3-242ENST00000640577 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
SPIN3-242ENST00000640577 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
SPIN3-242ENST00000640577 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SPIN3-242ENST00000640577 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
SPIN3-242ENST00000640577 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
SPIN3-242ENST00000640577 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
SPIN3-242ENST00000640577 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
SPIN3-242ENST00000640577 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
SPIN3-242ENST00000640577 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
SPIN3-242ENST00000640577 CRCT1Q9UGL9 99 aa5.17□□□□□ -1.58
SPIN3-242ENST00000640577 MT1MQ8N339 61 aa5.14□□□□□ -1.59
SPIN3-242ENST00000640577 MT1GP13640 62 aa5.12□□□□□ -1.59
SPIN3-242ENST00000640577 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
SPIN3-242ENST00000640577 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
SPIN3-242ENST00000640577 INE1O15225 51 aa5.07□□□□□ -1.6
SPIN3-242ENST00000640577 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
SPIN3-242ENST00000640577 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
SPIN3-242ENST00000640577 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
SPIN3-242ENST00000640577 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
SPIN3-242ENST00000640577 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
SPIN3-242ENST00000640577 KRTAP5-9P26371 169 aa4.96□□□□□ -1.61
SPIN3-242ENST00000640577 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
SPIN3-242ENST00000640577 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
SPIN3-242ENST00000640577 SPRR2EP22531 72 aa4.8□□□□□ -1.64
SPIN3-242ENST00000640577 SPRR2BP35325 72 aa4.8□□□□□ -1.64
SPIN3-242ENST00000640577 SPRR2AP35326 72 aa4.8□□□□□ -1.64
SPIN3-242ENST00000640577 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
SPIN3-242ENST00000640577 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
SPIN3-242ENST00000640577 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.66
SPIN3-242ENST00000640577 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SPIN3-242ENST00000640577 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SPIN3-242ENST00000640577 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
SPIN3-242ENST00000640577 SPRR2DP22532 72 aa4.6□□□□□ -1.67
SPIN3-242ENST00000640577 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
SPIN3-242ENST00000640577 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
SPIN3-242ENST00000640577 MT1AP04731 61 aa4.55□□□□□ -1.68
SPIN3-242ENST00000640577 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
SPIN3-242ENST00000640577 NEBP20929 6669 aa4.46□□□□□ -1.7
SPIN3-242ENST00000640577 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SPIN3-242ENST00000640577 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
SPIN3-242ENST00000640577 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
SPIN3-242ENST00000640577 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
SPIN3-242ENST00000640577 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
SPIN3-242ENST00000640577 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.76
SPIN3-242ENST00000640577 MT3P25713 68 aa4.08□□□□□ -1.76
SPIN3-242ENST00000640577 MT4P47944 62 aa4.07□□□□□ -1.76
SPIN3-242ENST00000640577 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
SPIN3-242ENST00000640577 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
SPIN3-242ENST00000640577 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.77
SPIN3-242ENST00000640577 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
SPIN3-242ENST00000640577 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
SPIN3-242ENST00000640577 PRM1P04553 51 aa3.86□□□□□ -1.79
SPIN3-242ENST00000640577 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SPIN3-242ENST00000640577 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
SPIN3-242ENST00000640577 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
SPIN3-242ENST00000640577 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SPIN3-242ENST00000640577 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
SPIN3-242ENST00000640577 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
SPIN3-242ENST00000640577 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
SPIN3-242ENST00000640577 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SPIN3-242ENST00000640577 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SPIN3-242ENST00000640577 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
SPIN3-242ENST00000640577 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
SPIN3-242ENST00000640577 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SPIN3-242ENST00000640577 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
SPIN3-242ENST00000640577 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
SPIN3-242ENST00000640577 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
SPIN3-242ENST00000640577 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SPIN3-242ENST00000640577 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SPIN3-242ENST00000640577 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SPIN3-242ENST00000640577 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SPIN3-242ENST00000640577 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.02
SPIN3-242ENST00000640577 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms